RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 PAGE3Q5JUK9 113 aa23.44■■□□□ 1.34
TRIM28-204ENST00000594806 OR5M10Q6IEU7 315 aa23.44■■□□□ 1.34
TRIM28-204ENST00000594806 RTN4RQ9BZR6 473 aa23.44■■□□□ 1.34
TRIM28-204ENST00000594806 SLC6A15Q9H2J7 730 aa23.44■■□□□ 1.34
TRIM28-204ENST00000594806 DSN1Q9H410 356 aa23.44■■□□□ 1.34
TRIM28-204ENST00000594806 FBXL2Q9UKC9 423 aa23.44■■□□□ 1.34
TRIM28-204ENST00000594806 CORO2BQ9UQ03 480 aa23.44■■□□□ 1.34
TRIM28-204ENST00000594806 WDR45Q9Y484 360 aa23.44■■□□□ 1.34
TRIM28-204ENST00000594806 DIDO1Q9BTC0 2240 aaKnown RBP23.43■■□□□ 1.34
TRIM28-204ENST00000594806 LRRTM2O43300 516 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 AGFG2O95081 481 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 ACTL6AO96019 429 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 TPOP07202 933 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 DPP4P27487 766 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 CRATP43155 626 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 STX5Q13190 355 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 UBAP2LQ14157 1087 aaKnown RBP23.43■■□□□ 1.34
TRIM28-204ENST00000594806 ZNF630Q2M218 657 aaPredicted RBP23.43■■□□□ 1.34
TRIM28-204ENST00000594806 GLYR1Q49A26 553 aaPredicted RBP23.43■■□□□ 1.34
TRIM28-204ENST00000594806 GTDC1Q4AE62 458 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 COX20Q5RI15 118 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 WLSQ5T9L3 541 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 C1QL3Q5VWW1 255 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 LRRC74BQ6ZQY2 392 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 SPATA21Q7Z572 469 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 OR14L1PQ8NHC6 308 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 PNPT1Q8TCS8 783 aaKnown RBP23.43■■□□□ 1.34
TRIM28-204ENST00000594806 TP63Q9H3D4 680 aaPredicted RBP23.43■■□□□ 1.34
TRIM28-204ENST00000594806 TAS2R10Q9NYW0 307 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 CALML5Q9NZT1 146 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 MED11Q9P086 117 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 DKKL1Q9UK85 242 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 ACAD8Q9UKU7 415 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 PCNX3Q9H6A9 2034 aa23.43■■□□□ 1.34
TRIM28-204ENST00000594806 TMEM247A6NEH6 219 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 NPIPA2E9PIF3 369 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 NPIPA3F8WFD2 350 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 KIAA0513O60268 411 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 CCDC22O60826 627 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 SEC24CP53992 1094 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 GNGT1P63211 74 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 KLF10Q13118 480 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 GNA13Q14344 377 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 RGNQ15493 299 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 GPR68Q15743 365 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 GPAT3Q53EU6 434 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 EIPR1Q53HC9 387 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 COQ5Q5HYK3 327 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.42■■□□□ 1.34
TRIM28-204ENST00000594806 TYW3Q6IPR3 259 aaKnown RBP23.42■■□□□ 1.34
TRIM28-204ENST00000594806 CPLX4Q7Z7G2 160 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 CD163Q86VB7 1156 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 IFNEQ86WN2 208 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 DOLPP1Q86YN1 238 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 ZNF619Q8N2I2 560 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 P2RX2Q9UBL9 471 aa23.42■■□□□ 1.34
TRIM28-204ENST00000594806 SUCOQ9UBS9 1254 aaKnown RBP23.42■■□□□ 1.34
TRIM28-204ENST00000594806 ERRFI1Q9UJM3 462 aaPredicted RBP23.42■■□□□ 1.34
TRIM28-204ENST00000594806 TRBV5-3A0A0A0MS03 114 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 C15orf38-AP3S2A0A0A6YYH1 394 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 FIGNL2A6NMB9 653 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 LINC01387J3KSC0 135 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 FCMRO60667 390 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 C1QCP02747 245 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 HOXD4P09016 255 aaPredicted RBP23.41■■□□□ 1.34
TRIM28-204ENST00000594806 BMP2P12643 396 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 ADH7P40394 386 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 DSTNP60981 165 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 SRSF1Q07955 248 aaKnown RBP eCLIP23.41■■□□□ 1.34
TRIM28-204ENST00000594806 FUT5Q11128 374 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 SF3A3Q12874 501 aaKnown RBP eCLIP23.41■■□□□ 1.344e-10■■□□□ 12.7
TRIM28-204ENST00000594806 GXYLT1Q4G148 440 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 WIPI1Q5MNZ9 446 aaPredicted RBP23.41■■□□□ 1.34
TRIM28-204ENST00000594806 VASNQ6EMK4 673 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 YRDCQ86U90 279 aaKnown RBP23.41■■□□□ 1.34
TRIM28-204ENST00000594806 AURKBQ96GD4 344 aaPredicted RBP23.41■■□□□ 1.34
TRIM28-204ENST00000594806 ELAC2Q9BQ52 826 aaKnown RBP23.41■■□□□ 1.34
TRIM28-204ENST00000594806 SLC25A37Q9NYZ2 338 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 SLAMF8Q9P0V8 285 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 SPRR3Q9UBC9 169 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 TINAGQ9UJW2 476 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 MKLN1Q9UL63 735 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 HRH3Q9Y5N1 445 aa23.41■■□□□ 1.34
TRIM28-204ENST00000594806 A0A087WZY1 265 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 BBIP1A8MTZ0 92 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 EVPLLA8MZ36 301 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 E9PLN8 166 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 CCL21O00585 134 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 ZIC3O60481 467 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 SEMA7AO75326 666 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 H6PDO95479 791 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 NR2F1P10589 423 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 ESRRAP11474 423 aaPredicted RBP23.4■■□□□ 1.34
TRIM28-204ENST00000594806 GABRA1P14867 456 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 CHMP24386 653 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 GYS2P54840 703 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 SF3B4Q15427 424 aaKnown RBP eCLIP23.4■■□□□ 1.342e-12■■■□□ 18.8
TRIM28-204ENST00000594806 AAGABQ6PD74 315 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 DLEU7Q6UYE1 221 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 FRRS1Q6ZNA5 592 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms