RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 BAIAP2L1Q9UHR4 511 aa18.38■□□□□ 0.53
TRIM47-207ENST00000593089 CLEC4AQ9UMR7 237 aa18.38■□□□□ 0.53
TRIM47-207ENST00000593089 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 ALG1L2C9J202 215 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 NPIPB8E9PQR5 432 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 AZIN1O14977 448 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 OXSR1O95747 527 aaPredicted RBP18.37■□□□□ 0.53
TRIM47-207ENST00000593089 PLGP00747 810 aaPredicted RBP18.37■□□□□ 0.53
TRIM47-207ENST00000593089 OPN1LWP04000 364 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 ACP2P11117 423 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 SDC1P18827 310 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 MAP3K8P41279 467 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 SLC6A8P48029 635 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 OCRLQ01968 901 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 ACKR1Q16570 336 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 CLEC9AQ6UXN8 241 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 C22orf34Q6ZV56 151 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 C10orf107Q8IVU9 208 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 C4orf33Q8N1A6 199 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 HOXB13Q92826 284 aaPredicted RBP18.37■□□□□ 0.53
TRIM47-207ENST00000593089 GIMAP5Q96F15 307 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 ZBED6CLQ96FA7 236 aaPredicted RBP18.37■□□□□ 0.53
TRIM47-207ENST00000593089 OTUB1Q96FW1 271 aaPredicted RBP18.37■□□□□ 0.53
TRIM47-207ENST00000593089 FCRL1Q96LA6 429 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 CCL19Q99731 98 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 NPAS1Q99742 590 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 PIP5K1AQ99755 562 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 IQCGQ9H095 443 aaKnown RBP18.37■□□□□ 0.53
TRIM47-207ENST00000593089 EMC9Q9Y3B6 208 aa18.37■□□□□ 0.53
TRIM47-207ENST00000593089 LINC00032P0C843 101 aa18.36■□□□□ 0.53
TRIM47-207ENST00000593089 ZNF17P17021 662 aa18.36■□□□□ 0.53
TRIM47-207ENST00000593089 KRT4P19013 534 aa18.36■□□□□ 0.53
TRIM47-207ENST00000593089 EFNA1P20827 205 aaPredicted RBP18.36■□□□□ 0.53
TRIM47-207ENST00000593089 FPR1P21462 350 aa18.36■□□□□ 0.53
TRIM47-207ENST00000593089 TBXA2RP21731 343 aa18.36■□□□□ 0.53
TRIM47-207ENST00000593089 RFTN2Q52LD8 501 aaPredicted RBP18.36■□□□□ 0.53
TRIM47-207ENST00000593089 ZAR1Q86SH2 424 aa18.36■□□□□ 0.53
TRIM47-207ENST00000593089 LRRC75A-AS1Q8N1F1 130 aa18.36■□□□□ 0.53
TRIM47-207ENST00000593089 SLC16A11Q8NCK7 471 aa18.36■□□□□ 0.53
TRIM47-207ENST00000593089 OR10D3Q8NH80 312 aa18.36■□□□□ 0.53
TRIM47-207ENST00000593089 EPS8L3Q8TE67 593 aaKnown RBP18.36■□□□□ 0.53
TRIM47-207ENST00000593089 ZNF764Q96H86 408 aaPredicted RBP18.36■□□□□ 0.53
TRIM47-207ENST00000593089 MARK4Q96L34 752 aa18.36■□□□□ 0.53
TRIM47-207ENST00000593089 MS4A4EQ96PG1 132 aa18.36■□□□□ 0.53
TRIM47-207ENST00000593089 TUBB1Q9H4B7 451 aa18.36■□□□□ 0.53
TRIM47-207ENST00000593089 FBXO34Q9NWN3 711 aa18.36■□□□□ 0.53
TRIM47-207ENST00000593089 HEATR5AQ86XA9 2040 aa18.35■□□□□ 0.53
TRIM47-207ENST00000593089 CXCL13O43927 109 aa18.35■□□□□ 0.53
TRIM47-207ENST00000593089 TBX19O60806 448 aa18.35■□□□□ 0.53
TRIM47-207ENST00000593089 KCNK2O95069 426 aa18.35■□□□□ 0.53
TRIM47-207ENST00000593089 NEFHP12036 1026 aa18.35■□□□□ 0.53
TRIM47-207ENST00000593089 CTBP2P56545 445 aa18.35■□□□□ 0.53
TRIM47-207ENST00000593089 SLC18A2Q05940 514 aa18.35■□□□□ 0.53
TRIM47-207ENST00000593089 PDE7AQ13946 482 aa18.35■□□□□ 0.53
TRIM47-207ENST00000593089 PCLAFQ15004 111 aa18.35■□□□□ 0.53
TRIM47-207ENST00000593089 DUSP5Q16690 384 aa18.35■□□□□ 0.53
TRIM47-207ENST00000593089 GALNTL6Q49A17 601 aa18.35■□□□□ 0.53
TRIM47-207ENST00000593089 MFSD12Q6NUT3 480 aa18.35■□□□□ 0.53
TRIM47-207ENST00000593089 WDR75Q8IWA0 830 aaKnown RBP18.35■□□□□ 0.53
TRIM47-207ENST00000593089 OR6K3Q8NGY3 331 aa18.35■□□□□ 0.53
TRIM47-207ENST00000593089 PERPQ96FX8 193 aa18.35■□□□□ 0.53
TRIM47-207ENST00000593089 C16orf58Q96GQ5 468 aa18.35■□□□□ 0.53
TRIM47-207ENST00000593089 SH3YL1Q96HL8 342 aaPredicted RBP18.35■□□□□ 0.53
TRIM47-207ENST00000593089 GATA5Q9BWX5 397 aaPredicted RBP18.35■□□□□ 0.53
TRIM47-207ENST00000593089 TMEM185BQ9H7F4 350 aa18.35■□□□□ 0.53
TRIM47-207ENST00000593089 RAI1Q7Z5J4 1906 aaPredicted RBP18.34■□□□□ 0.53
TRIM47-207ENST00000593089 A0A087WZY1 265 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 A0A1W2PRB8 838 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 CHEK2O96017 543 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 NGFRP08138 427 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 ALOX5P09917 674 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 HPGDP15428 266 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 LOXP28300 417 aaPredicted RBP18.34■□□□□ 0.53
TRIM47-207ENST00000593089 FRKP42685 505 aaPredicted RBP18.34■□□□□ 0.53
TRIM47-207ENST00000593089 ZNF41P51814 821 aaPredicted RBP18.34■□□□□ 0.53
TRIM47-207ENST00000593089 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.34■□□□□ 0.53
TRIM47-207ENST00000593089 CTU2Q2VPK5 515 aaKnown RBP18.34■□□□□ 0.53
TRIM47-207ENST00000593089 KANK2Q63ZY3 851 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 TDRPQ86YL5 185 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 DDIASQ8IXT1 998 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 GTPBP8Q8N3Z3 284 aaPredicted RBP18.34■□□□□ 0.53
TRIM47-207ENST00000593089 COX18Q8N8Q8 333 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 LRRN4CLQ8ND94 238 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 OR6Y1Q8NGX8 325 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 FAM110BQ8TC76 370 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 JADE3Q92613 823 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 ZBTB8AQ96BR9 441 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 GMPPAQ96IJ6 420 aaPredicted RBP18.34■□□□□ 0.53
TRIM47-207ENST00000593089 ADGRG7Q96K78 797 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 Q96MF0 132 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 RNF145Q96MT1 663 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 PLSCR4Q9NRQ2 329 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 ACSS1Q9NUB1 689 aaPredicted RBP18.34■□□□□ 0.53
TRIM47-207ENST00000593089 MED17Q9NVC6 651 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 NTMQ9P121 344 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 MID2Q9UJV3 735 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 MCTS1Q9ULC4 181 aaKnown RBP18.34■□□□□ 0.53
TRIM47-207ENST00000593089 DNAJC15Q9Y5T4 150 aa18.34■□□□□ 0.53
TRIM47-207ENST00000593089 DSCAMO60469 2012 aa18.33■□□□□ 0.53
TRIM47-207ENST00000593089 TNFSF11O14788 317 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms