RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 KRCC1Q9NPI7 259 aaPredicted RBP18.28■□□□□ 0.52
CLIP3-206ENST00000593074 A0A0A6YYC8 382 aaPredicted RBP18.27■□□□□ 0.52
CLIP3-206ENST00000593074 GXYLT2A0PJZ3 443 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 IRGMA1A4Y4 181 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 LMO7DNF2Z398 122 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 I3L1I5 382 aaPredicted RBP18.27■□□□□ 0.52
CLIP3-206ENST00000593074 MYL12BO14950 172 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 CBFA2T3O75081 653 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 SOX30O94993 753 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 S1PR1P21453 382 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 PPM1FP49593 454 aaPredicted RBP18.27■□□□□ 0.52
CLIP3-206ENST00000593074 SKP1P63208 163 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 C1DQ13901 141 aaKnown RBP18.27■□□□□ 0.52
CLIP3-206ENST00000593074 MINDY4Q4G0A6 757 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 CLEC12AQ5QGZ9 265 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 FIGNL1Q6PIW4 674 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 C17orf82Q86X59 251 aaPredicted RBP18.27■□□□□ 0.52
CLIP3-206ENST00000593074 SDR16C5Q8N3Y7 309 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 OR4Q3Q8NH05 313 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 C1orf216Q8TAB5 229 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 CLDN23Q96B33 292 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 FGF20Q9NP95 211 aaPredicted RBP18.27■□□□□ 0.52
CLIP3-206ENST00000593074 NDUFB11Q9NX14 153 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 GPR52Q9Y2T5 361 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 CDH10Q9Y6N8 788 aa18.27■□□□□ 0.52
CLIP3-206ENST00000593074 NPIPA5A0A0B4J1W7 369 aa18.27■□□□□ 0.51
CLIP3-206ENST00000593074 NPIPA7E9PJI5 369 aa18.27■□□□□ 0.51
CLIP3-206ENST00000593074 FOXS1O43638 330 aa18.27■□□□□ 0.51
CLIP3-206ENST00000593074 GPX5O75715 221 aa18.27■□□□□ 0.51
CLIP3-206ENST00000593074 LYPD3O95274 346 aa18.27■□□□□ 0.51
CLIP3-206ENST00000593074 NPIPA8P0DM63 369 aa18.27■□□□□ 0.51
CLIP3-206ENST00000593074 RNH1P13489 461 aaKnown RBP18.27■□□□□ 0.51
CLIP3-206ENST00000593074 RPS3AP61247 264 aaKnown RBP18.27■□□□□ 0.51
CLIP3-206ENST00000593074 PLAURQ03405 335 aa18.27■□□□□ 0.51
CLIP3-206ENST00000593074 DEFB133Q30KQ1 61 aa18.27■□□□□ 0.51
CLIP3-206ENST00000593074 NIPAL1Q6NVV3 410 aa18.27■□□□□ 0.51
CLIP3-206ENST00000593074 PAQR6Q6TCH4 344 aa18.27■□□□□ 0.51
CLIP3-206ENST00000593074 CYP4Z2PQ8N1L4 340 aa18.27■□□□□ 0.51
CLIP3-206ENST00000593074 ANKK1Q8NFD2 765 aa18.27■□□□□ 0.51
CLIP3-206ENST00000593074 ZNF285Q96NJ3 590 aa18.27■□□□□ 0.51
CLIP3-206ENST00000593074 LMF2Q9BU23 707 aaKnown RBP18.27■□□□□ 0.51
CLIP3-206ENST00000593074 MED17Q9NVC6 651 aa18.27■□□□□ 0.51
CLIP3-206ENST00000593074 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 BLACEA4D250 179 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 TGFBR3LH3BV60 316 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 CDC42EP2O14613 210 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 SURF4O15260 269 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 GUSBP08236 651 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 GKN3PP0CG01 181 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 CSNK1EP49674 416 aaKnown RBP18.26■□□□□ 0.51
CLIP3-206ENST00000593074 IGLV3-21P80748 117 aaPredicted RBP18.26■□□□□ 0.51
CLIP3-206ENST00000593074 ATP1A4Q13733 1029 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 OR1Q1Q15612 314 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 PGGHGQ32M88 737 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 SLC30A6Q6NXT4 461 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 OGFOD3Q6PK18 319 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 WDR88Q6ZMY6 472 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 GDPGP1Q6ZNW5 385 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 Q7L0L9 218 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 RNFT2Q96EX2 444 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 TEX12Q9BXU0 123 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 RBCK1Q9BYM8 510 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 HCN3Q9P1Z3 774 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 ZNF223Q9UK11 482 aaPredicted RBP18.26■□□□□ 0.51
CLIP3-206ENST00000593074 CFL2Q9Y281 166 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 CACNA1IQ9P0X4 2223 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 HYKKA2RU49 373 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 HRO43593 1189 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 KCNK2O95069 426 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 OCM2P0CE71 109 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 OCMP0CE72 109 aaPredicted RBP18.26■□□□□ 0.51
CLIP3-206ENST00000593074 ETV5P41161 510 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 MTNR1AP48039 350 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 CXCL12P48061 93 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 GABRA4P48169 554 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 ETV1P50549 477 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 PSG6Q00889 435 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 ADAMTS18Q8TE60 1221 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 PPP1R14BQ96C90 147 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 EVA1AQ9H8M9 152 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 SEC14L4Q9UDX3 406 aa18.26■□□□□ 0.51
CLIP3-206ENST00000593074 SDC3O75056 442 aa18.25■□□□□ 0.51
CLIP3-206ENST00000593074 MYL12AP19105 171 aa18.25■□□□□ 0.51
CLIP3-206ENST00000593074 BCKDHBP21953 392 aa18.25■□□□□ 0.51
CLIP3-206ENST00000593074 EMDP50402 254 aa18.25■□□□□ 0.51
CLIP3-206ENST00000593074 IFITM3Q01628 133 aa18.25■□□□□ 0.51
CLIP3-206ENST00000593074 SLC13A2Q13183 592 aa18.25■□□□□ 0.51
CLIP3-206ENST00000593074 FAM53BQ14153 422 aa18.25■□□□□ 0.51
CLIP3-206ENST00000593074 TMEM44Q2T9K0 475 aa18.25■□□□□ 0.51
CLIP3-206ENST00000593074 TUBA3EQ6PEY2 450 aa18.25■□□□□ 0.51
CLIP3-206ENST00000593074 ZAR1Q86SH2 424 aa18.25■□□□□ 0.51
CLIP3-206ENST00000593074 C11orf74Q86VG3 221 aa18.25■□□□□ 0.51
CLIP3-206ENST00000593074 ZNF595Q8IYB9 648 aa18.25■□□□□ 0.51
CLIP3-206ENST00000593074 RNF113BQ8IZP6 322 aaKnown RBP18.25■□□□□ 0.51
CLIP3-206ENST00000593074 MROQ9BYG7 248 aa18.25■□□□□ 0.51
CLIP3-206ENST00000593074 FOLH1BQ9HBA9 442 aa18.25■□□□□ 0.51
CLIP3-206ENST00000593074 C14orf105Q9NVL8 296 aa18.25■□□□□ 0.51
CLIP3-206ENST00000593074 MRPS33Q9Y291 106 aaKnown RBP18.25■□□□□ 0.51
CLIP3-206ENST00000593074 TMEM129A0AVI4 362 aa18.24■□□□□ 0.51
CLIP3-206ENST00000593074 CTNSO60931 367 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms