RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 NAXDQ8IW45 347 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 SDR16C5Q8N3Y7 309 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 ARHGEF39Q8N4T4 335 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 AMER2Q8N7J2 671 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 TCEANCQ8N8B7 351 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 OR6C4Q8NGE1 309 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 OR6Q1Q8NGQ2 317 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 OR2I1PQ8NGU4 316 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 TMEM163Q8TC26 289 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 HOXB13Q92826 284 aaPredicted RBP9.26□□□□□ -0.93
VPS25-202ENST00000589219 OSTF1Q92882 214 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 PPP1R14BQ96C90 147 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 SLC41A3Q96GZ6 507 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 SH3YL1Q96HL8 342 aaPredicted RBP9.26□□□□□ -0.93
VPS25-202ENST00000589219 DACH2Q96NX9 599 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 IL4I1Q96RQ9 567 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 SDF2Q99470 211 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 MCHR1Q99705 422 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 TSSK6Q9BXA6 273 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 QRSL1Q9H0R6 528 aaKnown RBP9.26□□□□□ -0.93
VPS25-202ENST00000589219 DCSTAMPQ9H295 470 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 GAREM1Q9H706 876 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 AMBNQ9NP70 447 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 ADAP2Q9NPF8 381 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 MED17Q9NVC6 651 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 ETAA1Q9NY74 926 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 DNAJC27Q9NZQ0 273 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 TESQ9UGI8 421 aaKnown RBP9.26□□□□□ -0.93
VPS25-202ENST00000589219 ZMIZ1Q9ULJ6 1067 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 DIMT1Q9UNQ2 313 aaKnown RBP9.26□□□□□ -0.93
VPS25-202ENST00000589219 CLCA2Q9UQC9 943 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 ERGIC3Q9Y282 383 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 DOCK9Q9BZ29 2069 aa9.26□□□□□ -0.93
VPS25-202ENST00000589219 A0A1W2PR77 199 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 TTC36A6NLP5 189 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 MYL12BO14950 172 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 PRODHO43272 600 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 OR10H2O60403 315 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 RDH16O75452 317 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 NKX2-2O95096 273 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 RAB36O95755 333 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 CSF2P04141 144 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 RNH1P13489 461 aaKnown RBP9.25□□□□□ -0.93
VPS25-202ENST00000589219 ST6GAL1P15907 406 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 CD38P28907 300 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 MAP3K8P41279 467 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 OMPP47874 163 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 RGS6P49758 472 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 MLLT10P55197 1068 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 LSM3P62310 102 aaKnown RBP9.25□□□□□ -0.93
VPS25-202ENST00000589219 SNRPNP63162 240 aaKnown RBP9.25□□□□□ -0.93
VPS25-202ENST00000589219 ZNHIT3Q15649 155 aaPredicted RBP9.25□□□□□ -0.93
VPS25-202ENST00000589219 SYT16Q17RD7 645 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 MINDY4Q4G0A6 757 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 KLHL22Q53GT1 634 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 ZNF542PQ5EBM4 170 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 C3orf38Q5JPI3 329 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 GARNL3Q5VVW2 1013 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 C19orf48Q6RUI8 117 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 GDPGP1Q6ZNW5 385 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 Q6ZNX1 250 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 PRSS41Q7RTY9 318 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 HMGN2P46Q86SG4 172 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 GLRX5Q86SX6 157 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 MCATQ8IVS2 390 aaKnown RBP9.25□□□□□ -0.93
VPS25-202ENST00000589219 OR4N5Q8IXE1 308 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 ZNF595Q8IYB9 648 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 VWA5B2Q8N398 1253 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 SLC15A4Q8N697 577 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 IQCF1Q8N6M8 205 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 TMCO5AQ8N6Q1 288 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 MINDY2Q8NBR6 621 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 TMEM52Q8NDY8 209 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 OR9Q1Q8NGQ5 310 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 SLC35B4Q969S0 331 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 CTHRC1Q96CG8 243 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 TCTN2Q96GX1 697 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 CD180Q99467 661 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 MGLLQ99685 303 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 CDC6Q99741 560 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 PELOQ9BRX2 385 aaKnown RBP9.25□□□□□ -0.93
VPS25-202ENST00000589219 LMF2Q9BU23 707 aaKnown RBP9.25□□□□□ -0.93
VPS25-202ENST00000589219 SLIRPQ9GZT3 109 aaKnown RBP9.25□□□□□ -0.93
VPS25-202ENST00000589219 CHRNA10Q9GZZ6 450 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 MMP27Q9H306 513 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 ANKRA2Q9H9E1 313 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 MRPS18AQ9NVS2 196 aaKnown RBP9.25□□□□□ -0.93
VPS25-202ENST00000589219 TVP23BQ9NYZ1 205 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 DOLKQ9UPQ8 538 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 TMEM5Q9Y2B1 443 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 GPR55Q9Y2T6 319 aaPredicted RBP9.25□□□□□ -0.93
VPS25-202ENST00000589219 LSM2Q9Y333 95 aaKnown RBP9.25□□□□□ -0.93
VPS25-202ENST00000589219 CHST2Q9Y4C5 530 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 PCDHGB2Q9Y5G2 931 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 CDH10Q9Y6N8 788 aa9.25□□□□□ -0.93
VPS25-202ENST00000589219 TRAPPC13A5PLN9 417 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 METTL15A6NJ78 407 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 KDM4EB2RXH2 506 aaPredicted RBP9.24□□□□□ -0.93
VPS25-202ENST00000589219 SGK494L7N484 410 aa9.24□□□□□ -0.93
VPS25-202ENST00000589219 FLRT2O43155 660 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms