RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 SEZ6L2Q6UXD5 910 aa16.45■□□□□ 0.22
CCDC43-204ENST00000588687 IKBIPQ70UQ0 350 aa16.45■□□□□ 0.22
CCDC43-204ENST00000588687 TRIM46Q7Z4K8 759 aa16.45■□□□□ 0.22
CCDC43-204ENST00000588687 SLC22A9Q8IVM8 553 aa16.45■□□□□ 0.22
CCDC43-204ENST00000588687 NOA1Q8NC60 698 aaKnown RBP16.45■□□□□ 0.22
CCDC43-204ENST00000588687 OR4C3Q8NH37 302 aa16.45■□□□□ 0.22
CCDC43-204ENST00000588687 SLC9A6Q92581 669 aa16.45■□□□□ 0.22
CCDC43-204ENST00000588687 GIMAP5Q96F15 307 aa16.45■□□□□ 0.22
CCDC43-204ENST00000588687 TSPYL1Q9H0U9 437 aa16.45■□□□□ 0.22
CCDC43-204ENST00000588687 MRTO4Q9UKD2 239 aaKnown RBP16.45■□□□□ 0.22
CCDC43-204ENST00000588687 EMCNQ9ULC0 261 aa16.45■□□□□ 0.22
CCDC43-204ENST00000588687 CADP27708 2225 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 A0A087WZY1 265 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 A0A0J9YW62 118 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 EXOC1LA0A1B0GW35 172 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 A0A1W2PRB8 838 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 NPIPB8E9PQR5 432 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 OVOL3O00110 214 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 CXCL13O43927 109 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 GCM2O75603 506 aaPredicted RBP16.44■□□□□ 0.22
CCDC43-204ENST00000588687 OXSR1O95747 527 aaPredicted RBP16.44■□□□□ 0.22
CCDC43-204ENST00000588687 THBS1P07996 1170 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 GABRA3P34903 492 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 CLK3P49761 638 aaKnown RBP16.44■□□□□ 0.22
CCDC43-204ENST00000588687 PSMD4P55036 377 aaKnown RBP16.44■□□□□ 0.22
CCDC43-204ENST00000588687 ATP5J2P56134 94 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 KIAA0040Q15053 153 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 EXOSC6Q5RKV6 272 aaKnown RBP16.44■□□□□ 0.22
CCDC43-204ENST00000588687 ADAM5Q6NVV9 412 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 ZNF551Q7Z340 670 aaPredicted RBP16.44■□□□□ 0.22
CCDC43-204ENST00000588687 EXOC3L1Q86VI1 746 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 WFDC8Q8IUA0 241 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 LRRN4CLQ8ND94 238 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 FAM76AQ8TAV0 307 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 RAB3IL1Q8TBN0 382 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 POC1BQ8TC44 478 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 MZB1Q8WU39 189 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 ZNF764Q96H86 408 aaPredicted RBP16.44■□□□□ 0.22
CCDC43-204ENST00000588687 EGLN2Q96KS0 407 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 MID1IP1Q9NPA3 183 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 EQTNQ9NQ60 294 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 MED17Q9NVC6 651 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 NTMQ9P121 344 aa16.44■□□□□ 0.22
CCDC43-204ENST00000588687 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.44■□□□□ 0.22
CCDC43-204ENST00000588687 TTC36A6NLP5 189 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 TNFSF11O14788 317 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 RSL1D1O76021 490 aaKnown RBP16.43■□□□□ 0.22
CCDC43-204ENST00000588687 KCNH1O95259 989 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 PLGP00747 810 aaPredicted RBP16.43■□□□□ 0.22
CCDC43-204ENST00000588687 ABHD2P08910 425 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 DANCRP0C864 163 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 ACP2P11117 423 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 SHC1P29353 583 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 CTBP2P56545 445 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 RAC1P63000 192 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 SLC29A2Q14542 456 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 SPDYAQ5MJ70 313 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 MFSD12Q6NUT3 480 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 NOXRED1Q6NXP6 359 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 BEND4Q6ZU67 534 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 WDR75Q8IWA0 830 aaKnown RBP16.43■□□□□ 0.22
CCDC43-204ENST00000588687 GABRG1Q8N1C3 465 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 MMGT1Q8N4V1 131 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 OR2V1Q8NHB1 315 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 FAM110BQ8TC76 370 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 RNF128Q8TEB7 428 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 AKAP1Q92667 903 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCDC43-204ENST00000588687 ZBTB8AQ96BR9 441 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 RNF145Q96MT1 663 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 GLRX2Q9NS18 164 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 PAQR5Q9NXK6 330 aaPredicted RBP16.43■□□□□ 0.22
CCDC43-204ENST00000588687 MCTS1Q9ULC4 181 aaKnown RBP16.43■□□□□ 0.22
CCDC43-204ENST00000588687 GPR52Q9Y2T5 361 aa16.43■□□□□ 0.22
CCDC43-204ENST00000588687 WBP11Q9Y2W2 641 aaKnown RBP16.43■□□□□ 0.22
CCDC43-204ENST00000588687 CCDC151A5D8V7 595 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 G3V2L1 256 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 OPN1LWP04000 364 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 SOD3P08294 240 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 FRKP42685 505 aaPredicted RBP16.42■□□□□ 0.22
CCDC43-204ENST00000588687 SLC18A2Q05940 514 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 HSPB3Q12988 150 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 CD226Q15762 336 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 ZNF239Q16600 458 aaKnown RBP16.42■□□□□ 0.22
CCDC43-204ENST00000588687 GLE1Q53GS7 698 aaKnown RBP16.42■□□□□ 0.22
CCDC43-204ENST00000588687 ZNF385BQ569K4 471 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 PPP4R4Q6NUP7 873 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 TFAP2EQ6VUC0 442 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 DNM1P46Q6ZS02 220 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 FRMD7Q6ZUT3 714 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 ESPNLQ6ZVH7 1005 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 ATG4DQ86TL0 474 aaPredicted RBP16.42■□□□□ 0.22
CCDC43-204ENST00000588687 GATSQ8NAP1 163 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 MAPK1IP1LQ8NDC0 245 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 ACTRT2Q8TDY3 377 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 CIDECQ96AQ7 238 aaPredicted RBP16.42■□□□□ 0.22
CCDC43-204ENST00000588687 S100PBPQ96BU1 408 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 PRRG4Q9BZD6 226 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 TMEM185BQ9H7F4 350 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 C3orf14Q9HBI5 128 aa16.42■□□□□ 0.22
CCDC43-204ENST00000588687 FBXO34Q9NWN3 711 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms