RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 SEC22BO75396 215 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 OXSR1O95747 527 aaPredicted RBP17.34■□□□□ 0.37
TRAF4-216ENST00000586813 NGFRP08138 427 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 FAM153BP0C7A2 387 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 UROSP10746 265 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 PPP3CBP16298 524 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 PRPH2P23942 346 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 CTBP2P56545 445 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 DNAJB13P59910 316 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 CTU2Q2VPK5 515 aaKnown RBP17.34■□□□□ 0.37
TRAF4-216ENST00000586813 FAM153CQ494X1 144 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 BEX5Q5H9J7 111 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 STAC2Q6ZMT1 411 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 GALNT10Q86SR1 603 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 WDR75Q8IWA0 830 aaKnown RBP17.34■□□□□ 0.37
TRAF4-216ENST00000586813 IFT20Q8IY31 132 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 GTPBP8Q8N3Z3 284 aaPredicted RBP17.34■□□□□ 0.37
TRAF4-216ENST00000586813 CDRT4Q8N9R6 151 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 OR4C3Q8NH37 302 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 ZNF764Q96H86 408 aaPredicted RBP17.34■□□□□ 0.37
TRAF4-216ENST00000586813 MS4A4EQ96PG1 132 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 NPAS1Q99742 590 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 TXLNGYQ9BZA5 131 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 GSX2Q9BZM3 304 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 HHATLQ9HCP6 504 aa17.34■□□□□ 0.37
TRAF4-216ENST00000586813 PAQR5Q9NXK6 330 aaPredicted RBP17.34■□□□□ 0.37
TRAF4-216ENST00000586813 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 C7orf72A4D263 438 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 NPIPB8E9PQR5 432 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 SMAD7O15105 426 aaKnown RBP17.33■□□□□ 0.36
TRAF4-216ENST00000586813 IL11P20809 199 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 PTH2RP49190 550 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 PRKAG1P54619 331 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 PLPPR5Q32ZL2 321 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 CCDC153Q494R4 210 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 ZNF385BQ569K4 471 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 CLEC6AQ6EIG7 209 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 SH2D5Q6ZV89 423 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 SZRD1Q7Z422 152 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 GATSQ8NAP1 163 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 CEP70Q8NHQ1 597 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 ZFP28Q8NHY6 868 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 FBXO30Q8TB52 745 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 IGFBPL1Q8WX77 278 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 ZBTB8AQ96BR9 441 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 GIMAP5Q96F15 307 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 CCT7Q99832 543 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 LRTM1Q9HBL6 345 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 C1orf109Q9NX04 203 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 NTMQ9P121 344 aa17.33■□□□□ 0.36
TRAF4-216ENST00000586813 MCTS1Q9ULC4 181 aaKnown RBP17.33■□□□□ 0.36
TRAF4-216ENST00000586813 TLN2Q9Y4G6 2542 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 ROS1P08922 2347 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 A0A1W2PRB8 838 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 SLC28A1O00337 649 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 KLF4O43474 513 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 CXCL13O43927 109 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 PLIN3O60664 434 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 ACP2P11117 423 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 SDC1P18827 310 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 PSMA4P25789 261 aaKnown RBP17.32■□□□□ 0.36
TRAF4-216ENST00000586813 ZNF41P51814 821 aaPredicted RBP17.32■□□□□ 0.36
TRAF4-216ENST00000586813 SLC18A2Q05940 514 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 FIGNL1Q6PIW4 674 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 ZNF704Q6ZNC4 412 aaPredicted RBP17.32■□□□□ 0.36
TRAF4-216ENST00000586813 PLEKHM3Q6ZWE6 761 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 ZAR1Q86SH2 424 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 NUP43Q8NFH3 380 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 ACTRT2Q8TDY3 377 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 PPCDCQ96CD2 204 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 ZBED6CLQ96FA7 236 aaPredicted RBP17.32■□□□□ 0.36
TRAF4-216ENST00000586813 FCRL1Q96LA6 429 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 RNF145Q96MT1 663 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 IQCGQ9H095 443 aaKnown RBP17.32■□□□□ 0.36
TRAF4-216ENST00000586813 REEP4Q9H6H4 257 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 GLRX2Q9NS18 164 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 MED17Q9NVC6 651 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 OXSMQ9NWU1 459 aa17.32■□□□□ 0.36
TRAF4-216ENST00000586813 TNFSF11O14788 317 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 ADAMDEC1O15204 470 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 RGS14O43566 566 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 TBX19O60806 448 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 KCNK2O95069 426 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 SYNGR4O95473 234 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 OPN1LWP04000 364 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 PCSK6P29122 969 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 FRKP42685 505 aaPredicted RBP17.31■□□□□ 0.36
TRAF4-216ENST00000586813 NR1H2P55055 460 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 RAC1P63000 192 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 PDE7AQ13946 482 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 DUSP5Q16690 384 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 MFSD12Q6NUT3 480 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 ESPNLQ6ZVH7 1005 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 SLC16A11Q8NCK7 471 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 OR2T11Q8NH01 316 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 OR2V1Q8NHB1 315 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 FAM110BQ8TC76 370 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 SH3YL1Q96HL8 342 aaPredicted RBP17.31■□□□□ 0.36
TRAF4-216ENST00000586813 TSSK3Q96PN8 268 aa17.31■□□□□ 0.36
TRAF4-216ENST00000586813 ACTR6Q9GZN1 396 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms