RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 TMEM185BQ9H7F4 350 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 Q9N2J8 555 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 TMEM216Q9P0N5 145 aa10.59□□□□□ -0.71
BRCA1-225ENST00000586385 MAGED1Q9Y5V3 778 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-225ENST00000586385 A0A1W2PRB8 838 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 SERTM1A2A2V5 107 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 C7orf72A4D263 438 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 ALG1L2C9J202 215 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 CD5LO43866 347 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 OXSR1O95747 527 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-225ENST00000586385 PLGP00747 810 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-225ENST00000586385 GCAP28676 217 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 SERPINB9P50453 376 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 RAC1P63000 192 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 ZNF763Q0D2J5 394 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 C17orf67Q0P5P2 114 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 C2orf80Q0P641 193 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 TAB1Q15750 504 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 FIGNL1Q6PIW4 674 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 TFAP2EQ6VUC0 442 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 ZNF551Q7Z340 670 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-225ENST00000586385 NUFIP2Q7Z417 695 aaKnown RBP10.58□□□□□ -0.72
BRCA1-225ENST00000586385 WDR75Q8IWA0 830 aaKnown RBP10.58□□□□□ -0.72
BRCA1-225ENST00000586385 ZNF619Q8N2I2 560 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 GATSQ8NAP1 163 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 ABHD3Q8WU67 409 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 ROBO4Q8WZ75 1007 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 ZNF524Q96C55 264 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 RNF145Q96MT1 663 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 SRXN1Q9BYN0 137 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 PRRG4Q9BZD6 226 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 SHCBP1LQ9BZQ2 653 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 TNFRSF12AQ9NP84 129 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 MYNNQ9NPC7 610 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 MED17Q9NVC6 651 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 DDX18Q9NVP1 670 aaKnown RBP10.58□□□□□ -0.72
BRCA1-225ENST00000586385 FBXO34Q9NWN3 711 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 GDF2Q9UK05 429 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-225ENST00000586385 LIPT1Q9Y234 373 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 RNF115Q9Y4L5 304 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 CADP27708 2225 aa10.58□□□□□ -0.72
BRCA1-225ENST00000586385 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 DPRXA6NFQ7 191 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 CLOCKO15516 846 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 GPRIN2O60269 458 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 ADAM11O75078 769 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 SLITRK5O94991 958 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 NKX2-2O95096 273 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 NGFRP08138 427 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 ACP2P11117 423 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 EDNRAP25101 427 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 ECHS1P30084 290 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 HMOX2P30519 316 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 PHBP35232 272 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 SLC18A2Q05940 514 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 ETFDHQ16134 617 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 ZNF672Q499Z4 452 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-225ENST00000586385 EXOSC6Q5RKV6 272 aaKnown RBP10.57□□□□□ -0.72
BRCA1-225ENST00000586385 TEX35Q5T0J7 233 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 ALKBH2Q6NS38 261 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 DNAJC14Q6Y2X3 702 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-225ENST00000586385 KBTBD8Q8NFY9 601 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 CDC26Q8NHZ8 85 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 FAM110BQ8TC76 370 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 RNF128Q8TEB7 428 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 SMAP2Q8WU79 429 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-225ENST00000586385 OSTF1Q92882 214 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 FBXW5Q969U6 566 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 GIMAP5Q96F15 307 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 EGLN2Q96KS0 407 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 TRIM2Q9C040 744 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 GSTO2Q9H4Y5 243 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 GRPEL1Q9HAV7 217 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 EQTNQ9NQ60 294 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 YAE1D1Q9NRH1 226 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 GLRX2Q9NS18 164 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 ZNF180Q9UJW8 692 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 MCTS1Q9ULC4 181 aaKnown RBP10.57□□□□□ -0.72
BRCA1-225ENST00000586385 GRID1Q9ULK0 1009 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 CCL27Q9Y4X3 112 aa10.57□□□□□ -0.72
BRCA1-225ENST00000586385 POLR3HQ9Y535 204 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-225ENST00000586385 A0A087WZY1 265 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 ZNF814B7Z6K7 855 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 NPIPB8E9PQR5 432 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 POC1B-GALNT4F8VUJ3 575 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 OIP5O43482 229 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 TLX2O43763 284 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-225ENST00000586385 ENO1P06733 434 aaKnown RBP10.56□□□□□ -0.72
BRCA1-225ENST00000586385 TUBBP07437 444 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 IFI6P09912 130 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 LINGO3P0C6S8 592 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 IMPDH1P20839 514 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 ADH6P28332 368 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 IDUAP35475 653 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 GSTM5P46439 218 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 PRKAA2P54646 552 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 FAPQ12884 760 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 LCP2Q13094 533 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 SLC29A2Q14542 456 aa10.56□□□□□ -0.72
BRCA1-225ENST00000586385 CD226Q15762 336 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms