RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 RPS4Y1P22090 263 aaKnown RBP11.66□□□□□ -0.54
VMP1-202ENST00000585847 AQP1P29972 269 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 SSTR4P31391 388 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 PIGAP37287 484 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 SLC37A1P57057 533 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 EXT1Q16394 746 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 DECR1Q16698 335 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 GRAMD1BQ3KR37 738 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 OR2T5Q6IEZ7 315 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 PPP4R4Q6NUP7 873 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 H3F3CQ6NXT2 135 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 ENPP6Q6UWR7 440 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 PACS2Q86VP3 889 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 LILRA2Q8N149 483 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 ZNF527Q8NB42 609 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 PIK3C3Q8NEB9 887 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 OR2T29Q8NH02 315 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 C16orf52Q8NHV5 167 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 NUBPLQ8TB37 319 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 GPR151Q8TDV0 419 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 LRTOMTQ8WZ04 291 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 RAB8BQ92930 207 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 VMP1Q96GC9 406 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 C16orf58Q96GQ5 468 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 C7orf34Q96L11 122 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 FER1L6-AS2Q96M78 137 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 GABARAPL1Q9H0R8 117 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 ING2Q9H160 280 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 RUBCNLQ9H714 662 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 GPR55Q9Y2T6 319 aaPredicted RBP11.66□□□□□ -0.54
VMP1-202ENST00000585847 PIEZO2Q9H5I5 2752 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 CDK2AP1O14519 115 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 MAN1A2O60476 641 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 NME6O75414 186 aaPredicted RBP11.65□□□□□ -0.54
VMP1-202ENST00000585847 E2F6O75461 281 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 GCM2O75603 506 aaPredicted RBP11.65□□□□□ -0.54
VMP1-202ENST00000585847 RASAL1O95294 804 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 C1QCP02747 245 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 SERPINA7P05543 415 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 FESP07332 822 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 THRBP10828 461 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 NID1P14543 1247 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 NAGAP17050 411 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 CDH2P19022 906 aaPredicted RBP11.65□□□□□ -0.54
VMP1-202ENST00000585847 CD247P20963 164 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 FPR1P21462 350 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 PEX2P28328 305 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 DNAJA1P31689 397 aaKnown RBP11.65□□□□□ -0.54
VMP1-202ENST00000585847 KRT20P35900 424 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 TMED10P49755 219 aaKnown RBP11.65□□□□□ -0.54
VMP1-202ENST00000585847 RPS6KA3P51812 740 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 PGDP52209 483 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 CRYBA2P53672 197 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 NRG3P56975 720 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 KCNJ10P78508 379 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 PSG6Q00889 435 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 AIMP2Q13155 320 aaKnown RBP11.65□□□□□ -0.54
VMP1-202ENST00000585847 EXOSC7Q15024 291 aaKnown RBP11.65□□□□□ -0.54
VMP1-202ENST00000585847 MAPK11Q15759 364 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 SYPL1Q16563 259 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 BTBD16Q32M84 506 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 SHQ1Q6PI26 577 aaKnown RBP11.65□□□□□ -0.54
VMP1-202ENST00000585847 FRRS1Q6ZNA5 592 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 ZBTB49Q6ZSB9 765 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 GRAMD2AQ8IUY3 354 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 ZNF440Q8IYI8 595 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 DND1Q8IYX4 353 aaKnown RBP11.65□□□□□ -0.54
VMP1-202ENST00000585847 OR5K1Q8NHB7 308 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 FAM110BQ8TC76 370 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 CDS1Q92903 461 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 EXTL1Q92935 676 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 SLC35A4Q96G79 324 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 TPD52L3Q96J77 140 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 LCORQ96JN0 433 aaPredicted RBP11.65□□□□□ -0.54
VMP1-202ENST00000585847 ZNF300Q96RE9 604 aaPredicted RBP11.65□□□□□ -0.54
VMP1-202ENST00000585847 SDF2Q99470 211 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 PIP5K1AQ99755 562 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 RBM4BQ9BQ04 359 aaKnown RBP11.65□□□□□ -0.54
VMP1-202ENST00000585847 PSD2Q9BQI7 771 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 RBM4Q9BWF3 364 aaKnown RBP11.65□□□□□ -0.54
VMP1-202ENST00000585847 OR8D2Q9GZM6 311 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 ATP13A2Q9NQ11 1180 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 USE1Q9NZ43 259 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 OR10H1Q9Y4A9 318 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 LRRC42Q9Y546 428 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 ENPP4Q9Y6X5 453 aa11.65□□□□□ -0.54
VMP1-202ENST00000585847 HECTD1Q9ULT8 2610 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 HS6ST1O60243 411 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 TPST1O60507 370 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 ZNF354AO60765 605 aaPredicted RBP11.64□□□□□ -0.55
VMP1-202ENST00000585847 KCNK2O95069 426 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 WISP1O95388 367 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 LGI1O95970 557 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 ICAM2P13598 275 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 ZNF23P17027 643 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 GABRA3P34903 492 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 SOX11P35716 441 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 FUT5Q11128 374 aa11.64□□□□□ -0.55
VMP1-202ENST00000585847 EBPQ15125 230 aaKnown RBP11.64□□□□□ -0.55
VMP1-202ENST00000585847 ZNF141Q15928 474 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms