RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 C3orf14Q9HBI5 128 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 HHATLQ9HCP6 504 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 MIEF1Q9NQG6 463 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 NTMQ9P121 344 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 VDAC3Q9Y277 283 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 CCL27Q9Y4X3 112 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 A0A0J9YW62 118 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 GMFGO60234 142 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 NKX2-2O95096 273 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 KCNH1O95259 989 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 PLGP00747 810 aaPredicted RBP12.92□□□□□ -0.34
SDF2-202ENST00000585428 OPN1LWP04000 364 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 PRPS2P11908 318 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 RFX3P48380 749 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 ATP5J2P56134 94 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 CKAP4Q07065 602 aaKnown RBP12.92□□□□□ -0.34
SDF2-202ENST00000585428 NOXRED1Q6NXP6 359 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 ZNF551Q7Z340 670 aaPredicted RBP12.92□□□□□ -0.34
SDF2-202ENST00000585428 GALNT10Q86SR1 603 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 AKAP1Q92667 903 aaKnown RBP eCLIP12.92□□□□□ -0.34
SDF2-202ENST00000585428 OSTF1Q92882 214 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 HDHD5Q9BXW7 423 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 ACTR6Q9GZN1 396 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 PCNX3Q9H6A9 2034 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 MID1IP1Q9NPA3 183 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 FANCFQ9NPI8 374 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 MCTS1Q9ULC4 181 aaKnown RBP12.92□□□□□ -0.34
SDF2-202ENST00000585428 HIVEP2P31629 2446 aa12.92□□□□□ -0.34
SDF2-202ENST00000585428 CSPG4Q6UVK1 2322 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 DSCAMO60469 2012 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 A0A1W2PRB8 838 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 NPIPB8E9PQR5 432 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 NDUFB5O43674 189 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 CXCL13O43927 109 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 OXSR1O95747 527 aaPredicted RBP12.91□□□□□ -0.34
SDF2-202ENST00000585428 THBS1P07996 1170 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 NTSP30990 170 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 CARD18P57730 90 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 SLC29A2Q14542 456 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 PLPPR5Q32ZL2 321 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 GLE1Q53GS7 698 aaKnown RBP12.91□□□□□ -0.34
SDF2-202ENST00000585428 GTF2IRD2BQ6EKJ0 949 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 HEPHL1Q6MZM0 1159 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 DNAJC14Q6Y2X3 702 aaPredicted RBP12.91□□□□□ -0.34
SDF2-202ENST00000585428 ESPNLQ6ZVH7 1005 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 IKBIPQ70UQ0 350 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 GTF2IRD2Q86UP8 949 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 WFDC8Q8IUA0 241 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 OR2V1Q8NHB1 315 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 RAB3IL1Q8TBN0 382 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 POC1BQ8TC44 478 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 GPR151Q8TDV0 419 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 SLC9A6Q92581 669 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 ZBTB8AQ96BR9 441 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 METTL2AQ96IZ6 378 aaKnown RBP12.91□□□□□ -0.34
SDF2-202ENST00000585428 KLHDC3Q9BQ90 382 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 MED17Q9NVC6 651 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 LAMP3Q9UQV4 416 aa12.91□□□□□ -0.34
SDF2-202ENST00000585428 POLR3HQ9Y535 204 aaPredicted RBP12.91□□□□□ -0.34
SDF2-202ENST00000585428 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 EXOC1LA0A1B0GW35 172 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 G3V2L1 256 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 TNFSF11O14788 317 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 EFNA2O43921 213 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 GCM2O75603 506 aaPredicted RBP12.9□□□□□ -0.34
SDF2-202ENST00000585428 RSL1D1O76021 490 aaKnown RBP12.9□□□□□ -0.34
SDF2-202ENST00000585428 KCNK2O95069 426 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 SYNGR4O95473 234 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 GSTA1P08263 222 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 DANCRP0C864 163 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 LCN1P31025 176 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 SLC18A2Q05940 514 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 CLEC12BQ2HXU8 276 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 VPS26BQ4G0F5 336 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 HBMQ6B0K9 141 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 ZAR1Q86SH2 424 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 STK32CQ86UX6 486 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 TRABD2AQ86V40 505 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 GABRG1Q8N1C3 465 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 CDRT4Q8N9R6 151 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 SLC16A11Q8NCK7 471 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 STEAP2Q8NFT2 490 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 CEP70Q8NHQ1 597 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 CDC26Q8NHZ8 85 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 ACMSDQ8TDX5 336 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 GIMAP5Q96F15 307 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 ZNF764Q96H86 408 aaPredicted RBP12.9□□□□□ -0.34
SDF2-202ENST00000585428 RNF145Q96MT1 663 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 TNFRSF12AQ9NP84 129 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 FBXO34Q9NWN3 711 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 DCDC2Q9UHG0 476 aa12.9□□□□□ -0.34
SDF2-202ENST00000585428 RNF223E7ERA6 249 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 H3BQF6 201 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 TBX19O60806 448 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 TUBBP07437 444 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 SOD3P08294 240 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 ABHD2P08910 425 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 LINGO3P0C6S8 592 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 PRPH2P23942 346 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 AGTR1P30556 359 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms