RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 CCBE1Q6UXH8 406 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 KMT5CQ86Y97 462 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SLC41A2Q96JW4 573 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 C10orf90Q96M02 699 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 ZNF768Q9H5H4 540 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 POLE4Q9NR33 117 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 KCMF1Q9P0J7 381 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 RHCGQ9UBD6 479 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 DAPP1Q9UN19 280 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 A4GNTQ9UNA3 340 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 ADAMTS20P59510 1910 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 A0A0G2JPF8 293 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 HNRNPCL2B2RXH8 293 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 HNRNPCL3B7ZW38 293 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TMEM150CB9EJG8 249 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SGK494L7N484 410 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SLC28A2O43868 658 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CSO75390 466 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 NME6O75414 186 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 KCNK2O95069 426 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 HNRNPCL4P0DMR1 293 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TNFSF8P32971 234 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 IFNGR2P38484 337 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CRYBB2P43320 205 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TPTEP56180 551 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 EFNB1P98172 346 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TARDBPQ13148 414 aaKnown RBP eCLIP13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 NDUFA5Q16718 116 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 ATAD3BQ5T9A4 648 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SHISA5Q8N114 240 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SLC34A3Q8N130 599 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CLDN22Q8N7P3 220 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 OR5T3Q8NGG3 340 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 OR9A4Q8NGU2 314 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SLC7A13Q8TCU3 470 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 RHBDD1Q8TEB9 315 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 HTRA1Q92743 480 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 ATOH1Q92858 354 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SLC35G5Q96KT7 338 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 IL4I1Q96RQ9 567 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CTRCQ99895 268 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 MED18Q9BUE0 208 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 FNDC11Q9BVV2 318 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 PRRG3Q9BZD7 231 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 ANKRD19PQ9H560 264 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SMURF1Q9HCE7 757 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 PHF11Q9UIL8 331 aa13.95□□□□□ -0.18
CDK5RAP3-236ENST00000584991 A0A0A6YYC8 382 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 I3L1I5 382 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SYT5O00445 386 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CDX4O14627 284 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 MYL12BO14950 172 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TOX3O15405 576 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 COQ9O75208 318 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SEMA7AO75326 666 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 ERAL1O75616 437 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 LDOC1O95751 146 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 RAB36O95755 333 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 GAAP10253 952 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 NR2F6P10588 404 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 FOLR1P15328 257 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 BUD31P41223 144 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 GIPRP48546 466 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 PCYT1AP49585 367 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CDK5Q00535 292 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TNFRSF17Q02223 184 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 ZNF91Q05481 1191 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TCF15Q12870 199 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 HSPB3Q12988 150 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TMEM44Q2T9K0 475 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 RPS26P11Q5JNZ5 115 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 C3orf38Q5JPI3 329 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 GDPD3Q7L5L3 318 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 FAM83FQ8NEG4 500 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 OR4D9Q8NGE8 314 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 PRRC1Q96M27 445 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TMEM121BQ9BXQ6 578 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 POLR2J2Q9GZM3 115 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 LYRM4Q9HD34 91 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SLC35C2Q9NQQ7 365 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TESQ9UGI8 421 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CES1P1Q9UKY3 287 aa13.94□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CACNA1HO95180 2353 aa13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 IGHV5-10-1A0A0J9YXX1 117 aa13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 FLRT2O43155 660 aa13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 FOXS1O43638 330 aa13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 RDH16O75452 317 aa13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TP53P04637 393 aaPredicted RBP13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 NR2F1P10589 423 aa13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CPEP16870 476 aa13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 GTF2E2P29084 291 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 NTSP30990 170 aa13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SMSP52788 366 aa13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CD300CQ08708 224 aa13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SPEM2Q0P670 501 aa13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 RAB40BQ12829 278 aa13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TP53BP2Q13625 1128 aa13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 KCNJ8Q15842 424 aa13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SOWAHCQ53LP3 525 aaPredicted RBP13.93□□□□□ -0.18
CDK5RAP3-236ENST00000584991 DESI1Q6ICB0 168 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms