RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 TMEM41AQ96HV5 264 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 FRMD6Q96NE9 622 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 HOPXQ9BPY8 73 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-215ENST00000584944 SLC39A3Q9BRY0 314 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 TSPAN10Q9H1Z9 355 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-215ENST00000584944 MTHFD2LQ9H903 347 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-215ENST00000584944 SH2D2AQ9NP31 389 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 ASF1BQ9NVP2 202 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 SLC13A4Q9UKG4 626 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 NPIPA1Q9UND3 350 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 DTNAQ9Y4J8 743 aa12.68□□□□□ -0.38
TRAF4-215ENST00000584944 HCRTR2O43614 444 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 GMFGO60234 142 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 GMNNO75496 209 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 CBR3O75828 277 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 CYP7B1O75881 506 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 OXSR1O95747 527 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-215ENST00000584944 CD1EP15812 388 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 IL7RP16871 459 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 GPX2P18283 190 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 GNLYP22749 145 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 CCR4P51679 360 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 ZNF41P51814 821 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-215ENST00000584944 SLC10A1Q14973 349 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 LARS2Q15031 903 aaKnown RBP12.67□□□□□ -0.38
TRAF4-215ENST00000584944 SYPL1Q16563 259 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 ZNF630Q2M218 657 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-215ENST00000584944 KRTCAP3Q53RY4 240 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 PRR30Q53SZ7 412 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-215ENST00000584944 EXOSC6Q5RKV6 272 aaKnown RBP12.67□□□□□ -0.38
TRAF4-215ENST00000584944 TIGD3Q6B0B8 471 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 OR5M10Q6IEU7 315 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 HEPHL1Q6MZM0 1159 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 NANOGP8Q6NSW7 305 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 REEP3Q6NUK4 255 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 TMEM81Q6P7N7 255 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 LRRC74BQ6ZQY2 392 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 EIF3MQ7L2H7 374 aaKnown RBP12.67□□□□□ -0.38
TRAF4-215ENST00000584944 PLCZ1Q86YW0 608 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 TREML1Q86YW5 311 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 SLC30A8Q8IWU4 369 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 FAM109AQ8N4B1 249 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 METTL25Q8N6Q8 603 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 ANKFN1Q8N957 763 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 DUSP19Q8WTR2 217 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 SLC38A5Q8WUX1 472 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 NR4A3Q92570 626 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 TAAR6Q96RI8 345 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 ZNF607Q96SK3 696 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 CPPED1Q9BRF8 314 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-215ENST00000584944 SPATA5L1Q9BVQ7 753 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 SPATA9Q9BWV2 254 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 ZNF350Q9GZX5 532 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 NANOGQ9H9S0 305 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 A4GALTQ9NPC4 353 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 FBXO34Q9NWN3 711 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 SEC14L3Q9UDX4 400 aa12.67□□□□□ -0.38
TRAF4-215ENST00000584944 HIVEP3Q5T1R4 2406 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 NPIPA5A0A0B4J1W7 369 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 A0A0G2JPF8 293 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 HNRNPCL2B2RXH8 293 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 HNRNPCL3B7ZW38 293 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 ALG1L2C9J202 215 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 NPIPA7E9PJI5 369 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 GSTA4O15217 222 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 FADS1O60427 444 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 FCMRO60667 390 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 HNRNPCL1O60812 293 aaKnown RBP12.66□□□□□ -0.38
TRAF4-215ENST00000584944 TRIM3O75382 744 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-215ENST00000584944 SERPINB7O75635 380 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 CSTAP01040 98 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 DBIP07108 87 aaKnown RBP12.66□□□□□ -0.38
TRAF4-215ENST00000584944 NPIPA8P0DM63 369 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 HNRNPCL4P0DMR1 293 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 UBL4AP11441 157 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 UQCRBP14927 111 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 MAGEA5P43359 124 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 CPA2P48052 419 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 CASP6P55212 293 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 CDK6Q00534 326 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 RBBP4Q09028 425 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 SCARB2Q14108 478 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 C4orf17Q53FE4 359 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 RABL3Q5HYI8 236 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 PDZK1Q5T2W1 519 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 INTS11Q5TA45 600 aaKnown RBP12.66□□□□□ -0.38
TRAF4-215ENST00000584944 C16orf89Q6UX73 402 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 GFRALQ6UXV0 394 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 BNC2Q6ZN30 1099 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-215ENST00000584944 LURAP1LQ8IV03 231 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 MSRB3Q8IXL7 192 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 OR10A6Q8NH74 314 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 OR14L1PQ8NHC6 308 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 NFKBIDQ8NI38 313 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 BBS10Q8TAM1 723 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 SLC26A7Q8TE54 656 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 OIT3Q8WWZ8 545 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 MAL2Q969L2 176 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 TMEM19Q96HH6 336 aa12.66□□□□□ -0.38
TRAF4-215ENST00000584944 SH3YL1Q96HL8 342 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms