RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 FBXO16Q8IX29 292 aaPredicted RBP4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 C11orf53Q8IXP5 236 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 C11orf42Q8N5U0 333 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 OR5AU1Q8NGC0 362 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 TMEM80Q96HE8 168 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 THUMPD2Q9BTF0 503 aaKnown RBP4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 ZNF416Q9BWM5 594 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 CRLS1Q9UJA2 301 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 MOKQ9UQ07 419 aa4.1□□□□□ -1.75
SMARCE1-219ENST00000583294 ADAMTS9Q9P2N4 1935 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 STX7O15400 261 aaKnown RBP4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 EFNA2O43921 213 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 ZNF254O75437 659 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 SCRG1O75711 98 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 CSF2P04141 144 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 BCKDHAP12694 445 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 ATP5A1P25705 553 aaKnown RBP4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 MDH1P40925 334 aaKnown RBP4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 BDKRB1P46663 353 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 BDH1Q02338 343 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 DCST2Q5T1A1 773 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 GET4Q7L5D6 327 aaPredicted RBP4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 APOBEC3FQ8IUX4 373 aaKnown RBP4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 CENPLQ8N0S6 344 aaPredicted RBP4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 GPR137CQ8N3F9 429 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 CADM2Q8N3J6 435 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 SPEM1Q8N4L4 309 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 OR13F1Q8NGS4 319 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 OR9A4Q8NGU2 314 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 ARNTL2Q8WYA1 636 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 PSMG2Q969U7 264 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 AKR1E2Q96JD6 320 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 COG4Q9H9E3 785 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 B4GALT7Q9UBV7 327 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 XPO7Q9UIA9 1087 aaKnown RBP4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 KLHL21Q9UJP4 597 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 PPIAL4AQ9Y536 164 aa4.09□□□□□ -1.75
SMARCE1-219ENST00000583294 IGLV8-61A0A075B6I0 122 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 CDX4O14627 284 aaPredicted RBP4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 TNFSF11O14788 317 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 HAT1O14929 419 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 CHRNA1P02708 482 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 CD55P08174 381 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 ZBTB25P24278 435 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 DHPSP49366 369 aaPredicted RBP4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 RND3P61587 244 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 RPS8P62241 208 aaKnown RBP4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 RPL32P62910 135 aaKnown RBP4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 VLDLRP98155 873 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 ST3GAL3Q11203 375 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 DPYSL3Q14195 570 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 KIAA0040Q15053 153 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 LRRK1Q38SD2 2015 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 TTC31Q49AM3 519 aaPredicted RBP4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 TMEM41BQ5BJD5 291 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 PAGE2BQ5JRK9 111 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 CELF3Q5SZQ8 465 aaKnown RBP4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 CARMIL1Q5VZK9 1371 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 OLFML2AQ68BL7 652 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 ANKRD37Q7Z713 158 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 GRAMD2AQ8IUY3 354 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 UBQLNLQ8IYU4 475 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 FAF2Q96CS3 445 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 SLC25A38Q96DW6 304 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 VPS39Q96JC1 886 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 CNOT6LQ96LI5 555 aaKnown RBP4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 MAPKAP1Q9BPZ7 522 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 FEM1AQ9BSK4 669 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 KRTAP4-4Q9BYR3 166 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 VNN3Q9NY84 501 aa4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 MRPL39Q9NYK5 338 aaKnown RBP4.08□□□□□ -1.76
SMARCE1-219ENST00000583294 ZNF646O15015 1829 aaPredicted RBP4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 ANKRD30BQ9BXX2 1392 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 FCN1O00602 326 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 HBQ1P09105 142 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 OR3A4PP47883 348 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 P2RY4P51582 365 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 OVGP1Q12889 678 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 ATXN7L3Q14CW9 347 aaPredicted RBP4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 CCDC57Q2TAC2 916 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 PRR30Q53SZ7 412 aaPredicted RBP4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 FHL5Q5TD97 284 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 DPY19L4Q7Z388 723 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 BADQ92934 168 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 C4orf36Q96KX1 117 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 NOL4LQ96MY1 436 aaPredicted RBP4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 KIR2DL4Q99706 377 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 PALMDQ9NP74 551 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 PAK1IP1Q9NWT1 392 aaPredicted RBP4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 APOBEC3BQ9UH17 382 aaKnown RBP4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 CYTH4Q9UIA0 394 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 ANAPC7Q9UJX3 599 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 KIF3AQ9Y496 699 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 FLVCR1Q9Y5Y0 555 aa4.07□□□□□ -1.76
SMARCE1-219ENST00000583294 ESYT2A0FGR8 921 aa4.06□□□□□ -1.76
SMARCE1-219ENST00000583294 OR6C65A6NJZ3 312 aa4.06□□□□□ -1.76
SMARCE1-219ENST00000583294 HEXBP07686 556 aa4.06□□□□□ -1.76
SMARCE1-219ENST00000583294 P0C879 139 aa4.06□□□□□ -1.76
SMARCE1-219ENST00000583294 NDPQ00604 133 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms