RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 DLX3O60479 287 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 TSPAN2O60636 221 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 SMIM24O75264 130 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 HSPA4LO95757 839 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 TP53P04637 393 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 CD8BP10966 210 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 CCKARP32238 428 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 SUCLG1P53597 346 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 CLDN15P56746 228 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 B3GALT5-AS1P59052 145 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 NAA20P61599 178 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 TNK1Q13470 666 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 BEX5Q5H9J7 111 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 FAM91A1Q658Y4 838 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 HMBOX1Q6NT76 420 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 ZNF704Q6ZNC4 412 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 C22orf34Q6ZV56 151 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 WFDC8Q8IUA0 241 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 C1orf52Q8N6N3 182 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 MAPK1IP1LQ8NDC0 245 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 GFM2Q969S9 779 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 EXOSC8Q96B26 276 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 BTBD9Q96Q07 612 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 LRRC37BQ96QE4 947 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 TRMOQ9BU70 441 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 C20orf27Q9GZN8 174 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 FOLH1BQ9HBA9 442 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 GIMAP4Q9NUV9 329 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 DCTN4Q9UJW0 460 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 PCTPQ9UKL6 214 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 EMC9Q9Y3B6 208 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 RRP15Q9Y3B9 282 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 RAP2CQ9Y3L5 183 aa11.35□□□□□ -0.59
CDK5RAP3-212ENST00000579175 ROS1P08922 2347 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 GNG14A0A1W2PPG7 69 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 A8MT66 165 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 SLCO1B7G3V0H7 640 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 ITM2AO43736 263 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 GMFGO60234 142 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 LYPLA1O75608 230 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 CGAP01215 116 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 CT45A8P0DMV1 189 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 CT45A9P0DMV2 189 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 TSPAN8P19075 237 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 EVI2BP34910 448 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 RFX3P48380 749 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 CLK3P49761 638 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 CTBP2P56545 445 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 CLDN20P56880 219 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 TRA2BP62995 288 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 GALNT1Q10472 559 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 SF3A3Q12874 501 aaKnown RBP eCLIP11.34□□□□□ -0.598e-7■■■□□ 14.9
CDK5RAP3-212ENST00000579175 ZNF155Q12901 538 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 TRAF3Q13114 568 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 VEZF1Q14119 521 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 GALNTL6Q49A17 601 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 CT45A2Q5DJT8 189 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 RPS27LQ71UM5 84 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 FAM214BQ7L5A3 538 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 FITM2Q8N6M3 262 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 OR4N2Q8NGD1 307 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 OR9A2Q8NGT5 310 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 NANOS1Q8WY41 292 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 ERP27Q96DN0 273 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 L3HYPDHQ96EM0 354 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 THOC1Q96FV9 657 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 PLPPR2Q96GM1 343 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 ZNF681Q96N22 645 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 HBEGFQ99075 208 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 RNF122Q9H9V4 155 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 ZBTB26Q9HCK0 441 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 FANCFQ9NPI8 374 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 TAS2R9Q9NYW1 312 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 LAMP3Q9UQV4 416 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 ZNF175Q9Y473 711 aa11.34□□□□□ -0.59
CDK5RAP3-212ENST00000579175 USF3Q68DE3 2245 aa11.33□□□□□ -0.59
CDK5RAP3-212ENST00000579175 OR2M5A3KFT3 312 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 RNF223E7ERA6 249 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 STX16-NPEPL1H3BU86 382 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 LINC01387J3KSC0 135 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 STX16O14662 325 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 HS3ST1O14792 307 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 HNRNPCL1O60812 293 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 ATP5HO75947 161 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 UBOX5O94941 541 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 OTCP00480 354 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 PLAUP00749 431 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 IFNA2P01563 188 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 IL3P08700 152 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 FCGR2AP12318 317 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 PPP3CBP16298 524 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 LOXP28300 417 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 ARRB2P32121 409 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 GAS1P54826 345 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 AQP5P55064 265 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 CDH13P55290 713 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 PSPHP78330 225 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 BNIP1Q12981 228 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 CLEC12BQ2HXU8 276 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms