RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 IGLV3-32A0A0A0MS00 114 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 RNF103-CHMP3A0A140T963 221 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 C2orf92A0A1B0GVN3 265 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 DYTNA2CJ06 578 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ANKRD33BA6NCL7 494 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 CCDC154A6NI56 674 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 OR6C70A6NIJ9 312 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 A8MUI8 341 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 MKRN2OSH3BPM6 223 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 NR5A2O00482 541 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ACOX3O15254 700 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 CFLARO15519 480 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ASNA1O43681 348 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 KIAA0513O60268 411 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 DNAJA2O60884 412 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 COQ9O75208 318 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 BCAS1O75363 584 aaPredicted RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 TRIM3O75382 744 aaPredicted RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 PPM1BO75688 479 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 BCAS2O75934 225 aaPredicted RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 KCNK2O95069 426 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 IL33O95760 270 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 EPPINO95925 133 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 F10P00742 488 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 PRB1P04280 392 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ALPPP05187 535 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 NGFRP08138 427 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 CHRM4P08173 479 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ABCB1P08183 1280 aaPredicted RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 CYP4B1P13584 511 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 NAGAP17050 411 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 GPX2P18283 190 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 TNNI3P19429 210 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 RPS4Y1P22090 263 aaKnown RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 UQCRC2P22695 453 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 SLC6A2P23975 617 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 CPOXP36551 454 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 TRPC1P48995 793 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 CCT3P49368 545 aaKnown RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 MANFP55145 182 aaKnown RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 PCBP3P57721 371 aaKnown RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 FBXW4P57775 412 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 DCAF7P61962 342 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 MRPS22P82650 360 aaKnown RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 PMP22Q01453 160 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 LASP1Q14847 261 aaKnown RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 INPP5JQ15735 1006 aaPredicted RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 FXNQ16595 210 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 HYAL4Q2M3T9 481 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 PGS1Q32NB8 556 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 VPS26BQ4G0F5 336 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 AGKQ53H12 422 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 LACTB2Q53H82 288 aaPredicted RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 RUNDC3AQ59EK9 446 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 COLEC12Q5KU26 742 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ANXA8L1Q5VT79 327 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 AGAP7PQ5VUJ5 663 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 BICRALQ6AI39 1079 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 REP15Q6BDI9 236 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 SPINK14Q6IE38 97 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ZCCHC12Q6PEW1 402 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 C6orf89Q6UWU4 347 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 DNAJC14Q6Y2X3 702 aaPredicted RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 FRRS1Q6ZNA5 592 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ASB18Q6ZVZ8 466 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 C6orf120Q7Z4R8 191 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 FGD2Q7Z6J4 655 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 MTDHQ86UE4 582 aaKnown RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 SNX32Q86XE0 403 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 PTOV1Q86YD1 416 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 HPS6Q86YV9 775 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 GPALPP1Q8IXQ4 340 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 PRR22Q8IZ63 422 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 SLC34A3Q8N130 599 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 FBXW8Q8N3Y1 598 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 SLC5A8Q8N695 610 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 BCORP1Q8N888 145 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 FADS6Q8N9I5 356 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 CDRT4Q8N9R6 151 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ZFP62Q8NB50 900 aaPredicted RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 GOLM1Q8NBJ4 401 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 POGLUT1Q8NBL1 392 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 FAM71CQ8NEG0 241 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 OR10G3Q8NGC4 313 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 OR56A1Q8NGH5 318 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 OR4A15Q8NGL6 344 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ZFP28Q8NHY6 868 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 FBXO30Q8TB52 745 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 SPPL2AQ8TCT8 520 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 GRHL3Q8TE85 626 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 PIK3R3Q92569 461 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 CDS1Q92903 461 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 RAB8BQ92930 207 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 PNPLA2Q96AD5 504 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 MOAP1Q96BY2 351 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 RCN3Q96D15 328 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 SPACA9Q96E40 222 aaPredicted RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 OMA1Q96E52 524 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 HSPBAP1Q96EW2 488 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms