RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 POGLUT1Q8NBL1 392 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 SLC26A7Q8TE54 656 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 PAQR8Q8TEZ7 354 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 WDR60Q8WVS4 1066 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 FAM162AQ96A26 154 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 ZG16BQ96DA0 208 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 JSRP1Q96MG2 331 aaPredicted RBP11.12□□□□□ -0.63
IFT20-207ENST00000578547 ZNF607Q96SK3 696 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 DOHHQ9BU89 302 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 OSBPL11Q9BXB4 747 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 HOXD1Q9GZZ0 328 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 SAP130Q9H0E3 1048 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 TRIM45Q9H8W5 580 aaPredicted RBP11.12□□□□□ -0.63
IFT20-207ENST00000578547 SH2D2AQ9NP31 389 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 KCNE5Q9UJ90 142 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 CNOT11Q9UKZ1 510 aaKnown RBP11.12□□□□□ -0.63
IFT20-207ENST00000578547 ABCG2Q9UNQ0 655 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 ATRXP46100 2492 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 ZFYVE26Q68DK2 2539 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 TRAV17A0A0B4J275 112 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 AGAP5A6NIR3 686 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 CLDN24A6NM45 220 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 C17orf51A8MQB3 221 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 NPIPB9F8W1W9 429 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 H3BNH8 94 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 NDUFB5O43674 189 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 GMFGO60234 142 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 NME2P1O60361 137 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 FADS1O60427 444 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 DPM1O60762 260 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 GCM2O75603 506 aaPredicted RBP11.11□□□□□ -0.63
IFT20-207ENST00000578547 SERPINB7O75635 380 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 DBIP07108 87 aaKnown RBP11.11□□□□□ -0.63
IFT20-207ENST00000578547 SP1P08047 785 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 NGFRP08138 427 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 GUSBP08236 651 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 ETS2P15036 469 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 IL7RP16871 459 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 GGT1P19440 569 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 RPS4Y1P22090 263 aaKnown RBP11.11□□□□□ -0.63
IFT20-207ENST00000578547 NME2P22392 152 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 CASP3P42574 277 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 DNASE1L1P49184 302 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 PCBP3P57721 371 aaKnown RBP11.11□□□□□ -0.63
IFT20-207ENST00000578547 BNIP2Q12982 314 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 ZNF141Q15928 474 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 NDUFAF6Q330K2 333 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 LIN52Q52LA3 116 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 KLHL26Q53HC5 615 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 ZNF311Q5JNZ3 666 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 SLC25A25Q6KCM7 469 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 APOOLQ6UXV4 268 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 ASRGL1Q7L266 308 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 GALNTL5Q7Z4T8 443 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 ARMC8Q8IUR7 673 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 TMCO5AQ8N6Q1 288 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 RBMXL3Q8N7X1 1067 aaKnown RBP11.11□□□□□ -0.63
IFT20-207ENST00000578547 SMYD1Q8NB12 490 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 OR52P1PQ8NH57 321 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 PHOSPHO1Q8TCT1 267 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 TAMM41Q96BW9 452 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 WBP1Q96G27 269 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 SECISBP2Q96T21 854 aaKnown RBP11.11□□□□□ -0.63
IFT20-207ENST00000578547 SPATA5L1Q9BVQ7 753 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 RTN4RQ9BZR6 473 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 CNIH4Q9P003 139 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 LUZP4Q9P127 313 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 SUCOQ9UBS9 1254 aaKnown RBP11.11□□□□□ -0.63
IFT20-207ENST00000578547 SEC14L3Q9UDX4 400 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 MAGEL2Q9UJ55 1249 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 ZNF443Q9Y2A4 671 aaPredicted RBP11.11□□□□□ -0.63
IFT20-207ENST00000578547 KLF13Q9Y2Y9 288 aaPredicted RBP11.11□□□□□ -0.63
IFT20-207ENST00000578547 DTNAQ9Y4J8 743 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 SNX13Q9Y5W8 968 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 GPC6Q9Y625 555 aaPredicted RBP11.11□□□□□ -0.63
IFT20-207ENST00000578547 ATMQ13315 3056 aa11.11□□□□□ -0.63
IFT20-207ENST00000578547 TLN1Q9Y490 2541 aaKnown RBP11.1□□□□□ -0.63
IFT20-207ENST00000578547 IGSF10Q6WRI0 2623 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 SERINC4A6NH21 518 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 ALG1L2C9J202 215 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 M0QX08 132 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 GTPBP1O00178 669 aaKnown RBP11.1□□□□□ -0.63
IFT20-207ENST00000578547 CDK2AP1O14519 115 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 GNB5O14775 395 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 CYP7B1O75881 506 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 STAMBPO95630 424 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 ZNF682O95780 498 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 ANGPTL1O95841 491 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 SERPINA1P01009 418 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 PABPC4LP0CB38 370 aaKnown RBP11.1□□□□□ -0.63
IFT20-207ENST00000578547 KDELR2P33947 212 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 RFC3P40938 356 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 PTGDSP41222 190 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 MASP1P48740 699 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 ZNF169Q14929 603 aaPredicted RBP11.1□□□□□ -0.63
IFT20-207ENST00000578547 LARS2Q15031 903 aaKnown RBP11.1□□□□□ -0.63
IFT20-207ENST00000578547 CD226Q15762 336 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 GLYATQ6IB77 296 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 OR5M10Q6IEU7 315 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 CYP2R1Q6VVX0 501 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms