RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 MED18Q9BUE0 208 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 PRRG4Q9BZD6 226 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 RNF122Q9H9V4 155 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 EML4Q9HC35 981 aaKnown RBP13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 NEUROD4Q9HD90 331 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 MKS1Q9NXB0 559 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 KLHL28Q9NXS3 571 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 ELOVL5Q9NYP7 299 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 ZNF226Q9NYT6 803 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 C6orf203Q9P0P8 240 aaPredicted RBP13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 NTMQ9P121 344 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 PRR14LQ5THK1 2151 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 TMEM233B4DJY2 109 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 EIF1AYO14602 144 aaKnown RBP13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 CTIFO43310 598 aaKnown RBP13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 NPHS1O60500 1241 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 KCNK2O95069 426 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 NGFRP08138 427 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 FGF4P08620 206 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 ALOX5P09917 674 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 FCGR2AP12318 317 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 BCKDHAP12694 445 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 TBXA2RP21731 343 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 EIF1AXP47813 144 aaKnown RBP13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 PCYT1AP49585 367 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 OCRLQ01968 901 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 DUSP5Q16690 384 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 FREM1Q5H8C1 2179 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 ARL13AQ5H913 290 aaPredicted RBP13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 MFSD12Q6NUT3 480 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 LRIG3Q6UXM1 1119 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 RIBC1Q8N443 379 aaPredicted RBP13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 COX18Q8N8Q8 333 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 BANPQ8N9N5 519 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 AGR3Q8TD06 166 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 JADE3Q92613 823 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 MTERF3Q96E29 417 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 OTUB1Q96FW1 271 aaPredicted RBP13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 CHMP6Q96FZ7 201 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 MECRQ9BV79 373 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 PROCRQ9UNN8 238 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 TRAF6Q9Y4K3 522 aa13.43□□□□□ -0.26
RN7SL560P-201ENST00000577943 A0A087WZY1 265 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 TMEM114B3SHH9 223 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 C16orf97H3BN30 126 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 PIP5K1BO14986 540 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 PEX11AO75192 247 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 SPAG7O75391 227 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 AQP8O94778 261 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 CGAP01215 116 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 CD8BP10966 210 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 ZNF17P17021 662 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 CD53P19397 219 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 MAPK1P28482 360 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 LCN1P31025 176 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 UGT2B10P36537 528 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 HPCAL1P37235 193 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 SERPINB4P48594 390 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 PRIM2P49643 509 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 ZNF41P51814 821 aaPredicted RBP13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 TMEM44Q2T9K0 475 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 UGT3A2Q3SY77 523 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 ZCCHC12Q6PEW1 402 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 ZCCHC23Q6ZST2 131 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 ZAR1Q86SH2 424 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 GGNQ86UU5 652 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 TRABD2AQ86V40 505 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 ZNF610Q8N9Z0 462 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 OR7A2PQ8NGA2 310 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 FAM110BQ8TC76 370 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 FAM120BQ96EK7 910 aaKnown RBP13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 PIK3IP1Q96FE7 263 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 C16orf58Q96GQ5 468 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 PPP3R2Q96LZ3 170 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 UBQLN4Q9NRR5 601 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 ZCCHC3Q9NUD5 404 aaKnown RBP13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 BEX4Q9NWD9 120 aaPredicted RBP13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 FBXO34Q9NWN3 711 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 SLC17A7Q9P2U7 560 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 SNX8Q9Y5X2 465 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 ROS1P08922 2347 aa13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 FLNAP21333 2647 aaKnown RBP13.42□□□□□ -0.26
RN7SL560P-201ENST00000577943 A0A1W2PRB8 838 aa13.41□□□□□ -0.26
RN7SL560P-201ENST00000577943 SCDO00767 359 aa13.41□□□□□ -0.26
RN7SL560P-201ENST00000577943 SCAMP2O15127 329 aaKnown RBP13.41□□□□□ -0.26
RN7SL560P-201ENST00000577943 PLGP00747 810 aaPredicted RBP13.41□□□□□ -0.26
RN7SL560P-201ENST00000577943 FOSL1P15407 271 aa13.41□□□□□ -0.26
RN7SL560P-201ENST00000577943 RPL3P39023 403 aaKnown RBP13.41□□□□□ -0.26
RN7SL560P-201ENST00000577943 POU6F2P78424 691 aaPredicted RBP13.41□□□□□ -0.26
RN7SL560P-201ENST00000577943 IFFO1Q0D2I5 559 aa13.41□□□□□ -0.26
RN7SL560P-201ENST00000577943 ATP6AP1LQ52LC2 224 aa13.41□□□□□ -0.26
RN7SL560P-201ENST00000577943 CCNJQ5T5M9 372 aa13.41□□□□□ -0.26
RN7SL560P-201ENST00000577943 FAM214BQ7L5A3 538 aa13.41□□□□□ -0.26
RN7SL560P-201ENST00000577943 ZNF550Q7Z398 422 aa13.41□□□□□ -0.26
RN7SL560P-201ENST00000577943 MISPQ8IVT2 679 aa13.41□□□□□ -0.26
RN7SL560P-201ENST00000577943 WDR75Q8IWA0 830 aaKnown RBP13.41□□□□□ -0.26
RN7SL560P-201ENST00000577943 GTPBP8Q8N3Z3 284 aaPredicted RBP13.41□□□□□ -0.26
RN7SL560P-201ENST00000577943 WFDC11Q8NEX6 87 aa13.41□□□□□ -0.26
RN7SL560P-201ENST00000577943 OR10D3Q8NH80 312 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms