RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 RBM4Q9BWF3 364 aaKnown RBP11.48□□□□□ -0.57
TSEN54-204ENST00000577197 AMBRA1Q9C0C7 1298 aa11.48□□□□□ -0.57
TSEN54-204ENST00000577197 CCDC86Q9H6F5 360 aaKnown RBP11.48□□□□□ -0.57
TSEN54-204ENST00000577197 ENOPH1Q9UHY7 261 aa11.48□□□□□ -0.57
TSEN54-204ENST00000577197 ZNF223Q9UK11 482 aaPredicted RBP11.48□□□□□ -0.57
TSEN54-204ENST00000577197 RAB26Q9ULW5 256 aa11.48□□□□□ -0.57
TSEN54-204ENST00000577197 LYVE1Q9Y5Y7 322 aa11.48□□□□□ -0.57
TSEN54-204ENST00000577197 MED19A0JLT2 244 aaPredicted RBP11.47□□□□□ -0.57
TSEN54-204ENST00000577197 PRAMEF25A6NGN4 478 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 ALG1L2C9J202 215 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 H3BNH8 94 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 E2F6O75461 281 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 OR5F1O95221 314 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 EPPINO95925 133 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 IGKV1D-16P01601 117 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 ACADSP16219 412 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 ABCD3P28288 659 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 PPP2R2BQ00005 443 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 PLCXD2Q0VAA5 305 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 CHAF1BQ13112 559 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 COL9A2Q14055 689 aaPredicted RBP11.47□□□□□ -0.57
TSEN54-204ENST00000577197 GPR68Q15743 365 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 KLHL26Q53HC5 615 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 SWT1Q5T5J6 900 aaKnown RBP11.47□□□□□ -0.57
TSEN54-204ENST00000577197 CCNJQ5T5M9 372 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 MRPL2Q5T653 305 aaKnown RBP11.47□□□□□ -0.57
TSEN54-204ENST00000577197 JMJD6Q6NYC1 403 aaPredicted RBP11.47□□□□□ -0.57
TSEN54-204ENST00000577197 FIGNL1Q6PIW4 674 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 IZUMO2Q6UXV1 221 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 SHISA6Q6ZSJ9 500 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 LSMEM1Q8N8F7 131 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 ZNF321PQ8N8H1 164 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 ZNF248Q8NDW4 579 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 ZG16BQ96DA0 208 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 SECISBP2Q96T21 854 aaKnown RBP11.47□□□□□ -0.57
TSEN54-204ENST00000577197 CIB1Q99828 191 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 OSBPL11Q9BXB4 747 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 RSPO3Q9BXY4 272 aaPredicted RBP11.47□□□□□ -0.57
TSEN54-204ENST00000577197 SEMA6AQ9H2E6 1030 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 Q9H521 79 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 MYOTQ9UBF9 498 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 KCNE5Q9UJ90 142 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 C15orf41Q9Y2V0 281 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 SAMHD1Q9Y3Z3 626 aaKnown RBP11.47□□□□□ -0.57
TSEN54-204ENST00000577197 CHST2Q9Y4C5 530 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 SPTBN2O15020 2390 aa11.47□□□□□ -0.57
TSEN54-204ENST00000577197 NSG1A0A0A6YYJ2 146 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 TRBV11-1A0A0K0K1C0 115 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 LOC101059948A0A1B0GTJ6 334 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 HTR3EA5X5Y0 456 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 SERINC4A6NH21 518 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 hCG_2039718K7EN88 272 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 AP3D1O14617 1153 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 PPM1BO75688 479 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 SEC24DO94855 1032 aaPredicted RBP11.46□□□□□ -0.57
TSEN54-204ENST00000577197 ALPLP05186 524 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 H1F0P07305 194 aaKnown RBP11.46□□□□□ -0.57
TSEN54-204ENST00000577197 ANXA8P13928 327 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 IL12BP29460 328 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 RRM2P31350 389 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 DLSTP36957 453 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 RPS6KA3P51812 740 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 NR0B1P51843 470 aaKnown RBP11.46□□□□□ -0.57
TSEN54-204ENST00000577197 RGS8P57771 180 aaPredicted RBP11.46□□□□□ -0.57
TSEN54-204ENST00000577197 ST3GAL3Q11203 375 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 DAG1Q14118 895 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 MAPK14Q16539 360 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 FNDC7Q5VTL7 733 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 LPCAT4Q643R3 524 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 FAAH2Q6GMR7 532 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 ZNF613Q6PF04 617 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 NUP54Q7Z3B4 507 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 PPP1R32Q7Z5V6 425 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 VRK2Q86Y07 508 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 CBR4Q8N4T8 237 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 OR4N2Q8NGD1 307 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 OR4C15Q8NGM1 316 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 ADAMTS17Q8TE56 1095 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 GAL3ST4Q96RP7 486 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 ZNF559Q9BR84 538 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 DEFB126Q9BYW3 111 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 DPH1Q9BZG8 443 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 TRIM2Q9C040 744 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 COQ10BQ9H8M1 238 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 NMNAT1Q9HAN9 279 aaPredicted RBP11.46□□□□□ -0.57
TSEN54-204ENST00000577197 ACER3Q9NUN7 267 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 SMPD3Q9NY59 655 aaPredicted RBP11.46□□□□□ -0.57
TSEN54-204ENST00000577197 LRCH1Q9Y2L9 728 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 NINQ8N4C6 2090 aa11.46□□□□□ -0.57
TSEN54-204ENST00000577197 EXPH5Q8NEV8 1989 aa11.45□□□□□ -0.58
TSEN54-204ENST00000577197 H0YAE9 185 aa11.45□□□□□ -0.58
TSEN54-204ENST00000577197 TNFRSF11BO00300 401 aa11.45□□□□□ -0.58
TSEN54-204ENST00000577197 PEX12O00623 359 aa11.45□□□□□ -0.58
TSEN54-204ENST00000577197 SCDO00767 359 aa11.45□□□□□ -0.58
TSEN54-204ENST00000577197 EIF4E2O60573 245 aaKnown RBP11.45□□□□□ -0.58
TSEN54-204ENST00000577197 NME6O75414 186 aaPredicted RBP11.45□□□□□ -0.58
TSEN54-204ENST00000577197 GADD45GO95257 159 aa11.45□□□□□ -0.58
TSEN54-204ENST00000577197 UTS2O95399 124 aa11.45□□□□□ -0.58
TSEN54-204ENST00000577197 MT-ND1P03886 318 aa11.45□□□□□ -0.58
TSEN54-204ENST00000577197 SERPINA7P05543 415 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms