RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 MCM8Q9UJA3 840 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 ZNF225Q9UK10 706 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 ABCG2Q9UNQ0 655 aa8.98□□□□□ -0.97
NPLOC4-220ENST00000576940 GXYLT2A0PJZ3 443 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 CCDC189A1A4V9 331 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 SLC35F4A4IF30 521 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 ELOA3DA6NLF2 546 aaPredicted RBP8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 UPK1AO00322 258 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 UBFD1O14562 309 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 OR4F21O95013 312 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 IGKV1D-16P01601 117 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 JUNP05412 331 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 IGHV4-31P0DP07 118 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 COL6A2P12110 1019 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 ZNF16P17020 682 aaPredicted RBP8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 SHC1P29353 583 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 TYK2P29597 1187 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 MPIP34949 423 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 THBS2P35442 1172 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 MAGEA4P43358 317 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 CARD18P57730 90 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 PRR5P85299 388 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 ITGADQ13349 1161 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 NRF1Q16656 503 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 GRAMD1BQ3KR37 738 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 ELOA3BQ3SY89 546 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 GGTA1PQ4G0N0 100 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 CPTPQ5TA50 214 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 AGAP6Q5VW22 663 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 CLEC2AQ6UVW9 174 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 TMEM107Q6UX40 140 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 ESPNLQ6ZVH7 1005 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 EXOC3L1Q86VI1 746 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 CCDC25Q86WR0 208 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 FAM9CQ8IZT9 166 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 ZNF525Q8N782 197 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 BANPQ8N9N5 519 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 GATSQ8NAP1 163 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 ELOA3Q8NG57 546 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 C16orf78Q8WTQ4 265 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 PIK3R3Q92569 461 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 KISS1RQ969F8 398 aaPredicted RBP8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 APIPQ96GX9 242 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 RNF145Q96MT1 663 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 BBS4Q96RK4 519 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 CHODLQ9H9P2 273 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 GIMAP4Q9NUV9 329 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 NMRK1Q9NWW6 199 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 LPAR3Q9UBY5 353 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 SNX6Q9UNH7 406 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 SNX8Q9Y5X2 465 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 MALRD1Q5VYJ5 2156 aa8.97□□□□□ -0.97
NPLOC4-220ENST00000576940 GNG14A0A1W2PPG7 69 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 A0A1W2PRB8 838 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 MYO1GB0I1T2 1018 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 C9JVG2 144 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 E7EQL1 145 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 STX16-NPEPL1H3BU86 382 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 CCDC188H7C350 402 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 STX16O14662 325 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 ABCD4O14678 606 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 EFNA2O43921 213 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 PCDH7O60245 1069 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 COQ9O75208 318 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 LYZL6O75951 148 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 ZNF17P17021 662 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 SRD5A1P18405 259 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 IGFBP5P24593 272 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 TTKP33981 857 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 GABRA3P34903 492 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 SFTPDP35247 375 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 NCBP2P52298 156 aaKnown RBP eCLIP8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 CDH11P55287 796 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 DSCR9P59020 149 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 BTKQ06187 659 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 C2orf80Q0P641 193 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 CALCOCO2Q13137 446 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 HEPACAMQ14CZ8 416 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 P2RY6Q15077 328 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 RAB35Q15286 201 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 TRADDQ15628 312 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 STK11Q15831 433 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 UAP1Q16222 522 aaPredicted RBP8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 FAM120AOSQ5T036 256 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 BHLHA15Q7RTS1 189 aaPredicted RBP8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 SAMD14Q8IZD0 417 aaPredicted RBP8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 LILRA2Q8N149 483 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 GTPBP8Q8N3Z3 284 aaPredicted RBP8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 CDYL2Q8N8U2 506 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 OR4C3Q8NH37 302 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 OR2W6PQ8NHA6 318 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 ZNF775Q96BV0 537 aaPredicted RBP8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 ADAD1Q96M93 576 aaKnown RBP8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 ERP44Q9BS26 406 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 EBPLQ9BY08 206 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 SRXN1Q9BYN0 137 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 Q9N2J8 555 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 MED17Q9NVC6 651 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 FAIMQ9NVQ4 179 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 GRHL1Q9NZI5 618 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms