RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 SIAH3Q8IW03 269 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 OR6V1Q8N148 313 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 ACER3Q9NUN7 267 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZNF226Q9NYT6 803 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 PET100P0DJ07 73 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 SRCP12931 536 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 SNRPBP14678 240 aaKnown RBP12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 PCMT1P22061 227 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 MTNR1BP49286 362 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 ILF3Q12906 894 aaKnown RBP eCLIP12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 FGL2Q14314 439 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 SLC7A13Q8TCU3 470 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 CPNE2Q96FN4 548 aaPredicted RBP12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 OPALINQ96PE5 141 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 DCLRE1CQ96SD1 692 aaKnown RBP12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 CARS2Q9HA77 564 aaKnown RBP12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 RBM7Q9Y580 266 aaKnown RBP12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 LOXHD1Q8IVV2 1947 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 GMDSO60547 372 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 UBL3O95164 117 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 VNN2O95498 520 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 RAF1P04049 648 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 NDUFS1P28331 727 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 GDNFP39905 211 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 ACTR1BP42025 376 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 ACTR1AP61163 376 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 SFXN4Q6P4A7 337 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 GSG1LQ6UXU4 331 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 MEPCEQ7L2J0 689 aaKnown RBP12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 ADGRF3Q8IZF5 1079 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 LRRC25Q8N386 305 aaPredicted RBP12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 CHST14Q8NCH0 376 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZNF680Q8NEM1 530 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 OR4M1Q8NGD0 313 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 NEK7Q8TDX7 302 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 TMEM41AQ96HV5 264 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 CNTNAP3BQ96NU0 1288 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 PKMYT1Q99640 499 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 SLC25A18Q9H1K4 315 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 TMEM38AQ9H6F2 299 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 WASH6PQ9NQA3 447 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 NDUFB11Q9NX14 153 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 ACTR10Q9NZ32 417 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 ANTXRLA6NF34 631 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZNF878C9JN71 531 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 PPM1BO75688 479 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 PPP3CBP16298 524 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 UGT2B7P16662 529 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 RHEBQ15382 184 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 OCLNQ16625 522 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 AMZ1Q400G9 498 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 CREB3L4Q8TEY5 395 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 METTL21AQ8WXB1 218 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 OR2A14Q96R47 310 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 DPYSL5Q9BPU6 564 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 TMEM43Q9BTV4 400 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 RNF208Q9H0X6 261 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 OR52D1Q9H346 318 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 TDP1Q9NUW8 608 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 WNT6Q9Y6F9 365 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 TMEM14AQ9Y6G1 99 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 TEX13DA0A0J9YY54 714 aaPredicted RBP12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 ETV6P41212 452 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 ABCA11PQ4W5N1 156 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 PAQR6Q6TCH4 344 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 TCTE3Q8IZS6 198 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 SYNPRQ8TBG9 265 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZNF480Q8WV37 535 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 SCLYQ96I15 445 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 MRI1Q9BV20 369 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 TAPBPLQ9BX59 468 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 C1QTNF2Q9BXJ5 285 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 ACTRT3Q9BYD9 372 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 FN3KQ9H479 309 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 LHX3Q9UBR4 397 aa12.35□□□□□ -0.43
PCDHGB3-201ENST00000576222 NUP214P35658 2090 aaPredicted RBP12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 CHP2O43745 196 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 XCR1P46094 333 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 TGM4P49221 684 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 CCR6P51684 374 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 C1orf189Q5VU69 101 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 KLHDC8AQ8IYD2 350 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZNF527Q8NB42 609 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 KLHDC9Q8NEP7 349 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 hCG_1807616A0A1W2PRN6 198 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 SLC9B1P1A6NJY1 282 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 IL12BP29460 328 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 AQP2P41181 271 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 KIAA1024LP59773 190 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 MCCD1P59942 119 aaPredicted RBP12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 GAB1Q13480 694 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 FAM189A2Q15884 450 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 TOR2AQ5JU69 321 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 KRBOX4Q5JUW0 171 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 FIGNL1Q6PIW4 674 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 SSX6Q7RTT6 188 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 INPP5EQ9NRR6 644 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 TRAPPC4Q9Y296 219 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 COL18A1P39060 1754 aa12.34□□□□□ -0.43
PCDHGB3-201ENST00000576222 IGLV3-10A0A075B6K4 115 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms