RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 NUDCD3Q8IVD9 361 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 OR2L13Q8N349 312 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 ACBD4Q8NC06 268 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 FAM83FQ8NEG4 500 aaPredicted RBP6.76□□□□□ -1.33
NUP88-205ENST00000572809 OR6Y1Q8NGX8 325 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 OR14L1PQ8NHC6 308 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 CEP70Q8NHQ1 597 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 PPP1R14CQ8TAE6 165 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 PIWIL2Q8TC59 973 aaKnown RBP6.76□□□□□ -1.33
NUP88-205ENST00000572809 AGR3Q8TD06 166 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 EFHD2Q96C19 240 aaPredicted RBP6.76□□□□□ -1.33
NUP88-205ENST00000572809 PPCDCQ96CD2 204 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 MTERF3Q96E29 417 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 DTNBP1Q96EV8 351 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 ZNF764Q96H86 408 aaPredicted RBP6.76□□□□□ -1.33
NUP88-205ENST00000572809 WDYHV1Q96HA8 205 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 PPP3R2Q96LZ3 170 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 TSSK3Q96PN8 268 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 CCT7Q99832 543 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 LMF2Q9BU23 707 aaKnown RBP6.76□□□□□ -1.33
NUP88-205ENST00000572809 UGT2B28Q9BY64 529 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 C3orf14Q9HBI5 128 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 Q9N2J8 555 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 SERHLQ9NQF3 203 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 SDHAF3Q9NRP4 125 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 DDX18Q9NVP1 670 aaKnown RBP6.76□□□□□ -1.33
NUP88-205ENST00000572809 GFOD1Q9NXC2 390 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 CGGBP1Q9UFW8 167 aaPredicted RBP6.76□□□□□ -1.33
NUP88-205ENST00000572809 ZDHHC2Q9UIJ5 367 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 MRTO4Q9UKD2 239 aaKnown RBP6.76□□□□□ -1.33
NUP88-205ENST00000572809 RAB21Q9UL25 225 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 CBLCQ9ULV8 474 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 CAMK2AQ9UQM7 478 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 MRPS18CQ9Y3D5 142 aaKnown RBP6.76□□□□□ -1.33
NUP88-205ENST00000572809 ITPR2Q14571 2701 aa6.76□□□□□ -1.33
NUP88-205ENST00000572809 PHF3Q92576 2039 aaKnown RBP6.76□□□□□ -1.33
NUP88-205ENST00000572809 TEX15Q9BXT5 2789 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 WDR91A4D1P6 747 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 TTC36A6NLP5 189 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 PSMG1O95456 288 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 FREM3P0C091 2139 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 CPN1P15169 458 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 DDX5P17844 614 aaKnown RBP6.75□□□□□ -1.33
NUP88-205ENST00000572809 SSTR2P30874 369 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 SRD5A2P31213 254 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 CEACAM8P31997 349 aaPredicted RBP6.75□□□□□ -1.33
NUP88-205ENST00000572809 ARRB2P32121 409 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 GABRA3P34903 492 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 TIMP3P35625 211 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 FRKP42685 505 aaPredicted RBP6.75□□□□□ -1.33
NUP88-205ENST00000572809 ETV4P43268 484 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 CLK3P49761 638 aaKnown RBP6.75□□□□□ -1.33
NUP88-205ENST00000572809 PRKAG1P54619 331 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 PSMD4P55036 377 aaKnown RBP6.75□□□□□ -1.33
NUP88-205ENST00000572809 TFF3Q07654 80 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 ZNF844Q08AG5 666 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 HSPB3Q12988 150 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 PDE7AQ13946 482 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 C21orf62-AS1Q17RA5 79 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 ATP6AP1LQ52LC2 224 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 ZNF385BQ569K4 471 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 C6orf136Q5SQH8 315 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 IL23RQ5VWK5 629 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 ENPP6Q6UWR7 440 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 SEM1Q6ZVN7 128 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 CBLL1Q75N03 491 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 FAM214BQ7L5A3 538 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 WDR53Q7Z5U6 358 aaPredicted RBP6.75□□□□□ -1.33
NUP88-205ENST00000572809 EXOC3L1Q86VI1 746 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 LURAP1LQ8IV03 231 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 LACC1Q8IV20 430 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 NUP43Q8NFH3 380 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 TNIP2Q8NFZ5 429 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 CLHC1Q8NHS4 586 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 ZFP28Q8NHY6 868 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 DUSP19Q8WTR2 217 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 RNF138Q8WVD3 245 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 CIDECQ96AQ7 238 aaPredicted RBP6.75□□□□□ -1.33
NUP88-205ENST00000572809 C14orf79Q96F83 325 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 ZBED6CLQ96FA7 236 aaPredicted RBP6.75□□□□□ -1.33
NUP88-205ENST00000572809 C3orf30Q96M34 536 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 TRIB1Q96RU8 372 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 TREX2Q9BQ50 279 aaPredicted RBP6.75□□□□□ -1.33
NUP88-205ENST00000572809 KRTAP4-11Q9BYQ6 195 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 TRIM8Q9BZR9 551 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 CENPHQ9H3R5 247 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 CALHM2Q9HA72 323 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 ACSS1Q9NUB1 689 aaPredicted RBP6.75□□□□□ -1.33
NUP88-205ENST00000572809 TAS2R10Q9NYW0 307 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 ZNF629Q9UEG4 869 aaPredicted RBP6.75□□□□□ -1.33
NUP88-205ENST00000572809 WIF1Q9Y5W5 379 aa6.75□□□□□ -1.33
NUP88-205ENST00000572809 CRYBG3Q68DQ2 2970 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 A0A1W2PRB8 838 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 CD8B2A6NJW9 211 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 ENO4A6NNW6 628 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 KDM4EB2RXH2 506 aaPredicted RBP6.74□□□□□ -1.33
NUP88-205ENST00000572809 DVL2O14641 736 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 TM9SF1O15321 606 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 BIRC5O15392 142 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 EMC8O43402 210 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms