RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 NUDT17P0C025 328 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 IL11P20809 199 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 TBXA2RP21731 343 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 GPC1P35052 558 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 CPOXP36551 454 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 CD226Q15762 336 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 CTU2Q2VPK5 515 aaKnown RBP16.27■□□□□ 0.2
CHD3-214ENST00000572579 DEFB113Q30KQ7 82 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 P4HA3Q7Z4N8 544 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 CXorf67Q86X51 503 aaPredicted RBP16.27■□□□□ 0.2
CHD3-214ENST00000572579 MEIOBQ8N635 442 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 CDRT4Q8N9R6 151 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 WFDC11Q8NEX6 87 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 AGR3Q8TD06 166 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 TCP10LQ8TDR4 215 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 PTGES2Q9H7Z7 377 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 KLHL28Q9NXS3 571 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 LGALS13Q9UHV8 139 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 ZDHHC2Q9UIJ5 367 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 MRTO4Q9UKD2 239 aaKnown RBP16.27■□□□□ 0.2
CHD3-214ENST00000572579 ZNF175Q9Y473 711 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 AP4B1Q9Y6B7 739 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 KCNE3Q9Y6H6 103 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 LINC01387J3KSC0 135 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 CTIFO43310 598 aaKnown RBP16.26■□□□□ 0.19
CHD3-214ENST00000572579 EMC8O43402 210 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 OIP5O43482 229 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 EFNA2O43921 213 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 PEX11AO75192 247 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 KCNH1O95259 989 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 NEFHP12036 1026 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 LOXP28300 417 aaPredicted RBP16.26■□□□□ 0.19
CHD3-214ENST00000572579 PCYT1AP49585 367 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 DIO3P55073 304 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 EEF1A1P68104 462 aaKnown RBP16.26■□□□□ 0.19
CHD3-214ENST00000572579 EEF1A1P5Q5VTE0 462 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 CAMKMTQ7Z624 323 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 DDIASQ8IXT1 998 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 CEP70Q8NHQ1 597 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 SMPDL3BQ92485 455 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 MS4A4EQ96PG1 132 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 ZNF395Q9H8N7 513 aaPredicted RBP16.26■□□□□ 0.19
CHD3-214ENST00000572579 VDAC3Q9Y277 283 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 TMED5Q9Y3A6 229 aa16.26■□□□□ 0.19
CHD3-214ENST00000572579 FLNAP21333 2647 aaKnown RBP16.25■□□□□ 0.19
CHD3-214ENST00000572579 A0A1W2PRB8 838 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 NDUFB5O43674 189 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 SLU7O95391 586 aaKnown RBP16.25■□□□□ 0.19
CHD3-214ENST00000572579 SHC1P29353 583 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 HOXC12P31275 282 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 UGT2B10P36537 528 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 CD79BP40259 229 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 CLK3P49761 638 aaKnown RBP16.25■□□□□ 0.19
CHD3-214ENST00000572579 RNF144AP50876 292 aaPredicted RBP16.25■□□□□ 0.19
CHD3-214ENST00000572579 PSMD4P55036 377 aaKnown RBP16.25■□□□□ 0.19
CHD3-214ENST00000572579 PTGR1Q14914 329 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 MLC1Q15049 377 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 PLPPR5Q32ZL2 321 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 C6orf136Q5SQH8 315 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 OR2A2Q6IF42 318 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 CHMP1BQ7LBR1 199 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 ZNF550Q7Z398 422 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 GTPBP8Q8N3Z3 284 aaPredicted RBP16.25■□□□□ 0.19
CHD3-214ENST00000572579 KRTCAP2Q8N6L1 136 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 CHDHQ8NE62 594 aaPredicted RBP16.25■□□□□ 0.19
CHD3-214ENST00000572579 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.25■□□□□ 0.19
CHD3-214ENST00000572579 POM121Q96HA1 1249 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 CXorf36Q9H7Y0 433 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 C3orf14Q9HBI5 128 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 MED17Q9NVC6 651 aa16.25■□□□□ 0.19
CHD3-214ENST00000572579 A0A0J9YW62 118 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 SCAMP2O15127 329 aaKnown RBP16.24■□□□□ 0.19
CHD3-214ENST00000572579 ADAMDEC1O15204 470 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 TYROBPO43914 113 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 HMGN2P05204 90 aaKnown RBP16.24■□□□□ 0.19
CHD3-214ENST00000572579 NID1P14543 1247 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 HOXB4P17483 251 aaPredicted RBP16.24■□□□□ 0.19
CHD3-214ENST00000572579 ETV4P43268 484 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 EEFSECP57772 596 aaKnown RBP16.24■□□□□ 0.19
CHD3-214ENST00000572579 OCRLQ01968 901 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 KEAP1Q14145 624 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 FBXW10Q5XX13 1052 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 SZRD1Q7Z422 152 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 OR10D3Q8NH80 312 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 ZFP28Q8NHY6 868 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 PSMA8Q8TAA3 256 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 AENQ8WTP8 325 aaKnown RBP16.24■□□□□ 0.19
CHD3-214ENST00000572579 MTERF3Q96E29 417 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 DTNBP1Q96EV8 351 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 HS3ST6Q96QI5 342 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 C1orf50Q9BV19 199 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 GPATCH2Q9NW75 528 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 MID2Q9UJV3 735 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 CLEC4AQ9UMR7 237 aa16.24■□□□□ 0.19
CHD3-214ENST00000572579 NPIPA5A0A0B4J1W7 369 aa16.23■□□□□ 0.19
CHD3-214ENST00000572579 NPIPA7E9PJI5 369 aa16.23■□□□□ 0.19
CHD3-214ENST00000572579 EIF1AYO14602 144 aaKnown RBP16.23■□□□□ 0.19
CHD3-214ENST00000572579 GOSR1O95249 250 aa16.23■□□□□ 0.19
CHD3-214ENST00000572579 CHEK2O96017 543 aa16.23■□□□□ 0.19
CHD3-214ENST00000572579 THBDP07204 575 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms