RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SLC3A1Q07837 685 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 DECR1Q16698 335 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 ERN2Q76MJ5 926 aaKnown RBP16.29■□□□□ 0.2
SCARF1-205ENST00000571272 LRRC17Q8N6Y2 441 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 ANGPTL6Q8NI99 470 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 SFXN5Q8TD22 340 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 ZNF431Q8TF32 576 aaPredicted RBP16.29■□□□□ 0.2
SCARF1-205ENST00000571272 ACOT12Q8WYK0 555 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 COL26A1Q96A83 441 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 COX14Q96I36 57 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 TIMP4Q99727 224 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 DPH1Q9BZG8 443 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 FOLH1BQ9HBA9 442 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 PRDM7Q9NQW5 492 aa16.29■□□□□ 0.2
SCARF1-205ENST00000571272 MRPL3P09001 348 aaKnown RBP16.28■□□□□ 0.2
SCARF1-205ENST00000571272 GAAP10253 952 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 CDK3Q00526 305 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 AGERQ15109 404 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 MLF2Q15773 248 aaPredicted RBP16.28■□□□□ 0.2
SCARF1-205ENST00000571272 TMEM44Q2T9K0 475 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 HNRNPA1L2Q32P51 320 aaKnown RBP16.28■□□□□ 0.2
SCARF1-205ENST00000571272 MBOAT2Q6ZWT7 520 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 GJD3Q8N144 294 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 SIX5Q8N196 739 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 SLC16A11Q8NCK7 471 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 SLAIN1Q8ND83 568 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 OR11H7Q8NGC8 314 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 ELP4Q96EB1 424 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 INSM2Q96T92 566 aaPredicted RBP16.28■□□□□ 0.2
SCARF1-205ENST00000571272 CREBZFQ9NS37 354 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 OR1A2Q9Y585 309 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 CACNG2Q9Y698 323 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 ZGLP1P0C6A0 271 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 ATP5A1P25705 553 aaKnown RBP16.28■□□□□ 0.2
SCARF1-205ENST00000571272 DDX6P26196 483 aaKnown RBP eCLIP16.28■□□□□ 0.2
SCARF1-205ENST00000571272 BTCP35070 178 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 PITPNBP48739 271 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 ABHD17CQ6PCB6 329 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 ARSGQ96EG1 525 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 MAP6Q96JE9 813 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 SYNPO2LQ9H987 977 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 PRKAG2Q9UGJ0 569 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 MRPS7Q9Y2R9 242 aaKnown RBP16.28■□□□□ 0.2
SCARF1-205ENST00000571272 USP34Q70CQ2 3546 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 DAPL1A0PJW8 107 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 IGLON5A6NGN9 336 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 KLF4O43474 513 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 RFPL3O75679 317 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 AHCYP23526 432 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 MPIP34949 423 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 THBS2P35442 1172 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 RPS7P62081 194 aaKnown RBP16.28■□□□□ 0.2
SCARF1-205ENST00000571272 BTG1P62324 171 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 E2F1Q01094 437 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 SFXN4Q6P4A7 337 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 GRASPQ7Z6J2 395 aaPredicted RBP16.28■□□□□ 0.2
SCARF1-205ENST00000571272 OAFQ86UD1 273 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 TMIEQ8NEW7 156 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 OR5W2Q8NH69 310 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 ADAMTS15Q8TE58 950 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 DOK4Q8TEW6 326 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 HSD17B8Q92506 261 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 SLC35A4Q96G79 324 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 UBL7Q96S82 380 aaPredicted RBP16.28■□□□□ 0.2
SCARF1-205ENST00000571272 MED17Q9NVC6 651 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 PHF11Q9UIL8 331 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 ING4Q9UNL4 249 aa16.28■□□□□ 0.2
SCARF1-205ENST00000571272 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.28■□□□□ 0.2
SCARF1-205ENST00000571272 LOC105369274A0A096LPK9 316 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 J3QRE1 110 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 SCAMP1O15126 338 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 DHFRP00374 187 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 HMGN1P05114 100 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 CD3GP09693 182 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 ACRP10323 421 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 HK1P19367 917 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 CXCL3P19876 107 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 ACSL1P33121 698 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 ELAVL3Q14576 367 aaKnown RBP16.27■□□□□ 0.2
SCARF1-205ENST00000571272 SLC25A35Q3KQZ1 300 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 ESCO2Q56NI9 601 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 ZBTB37Q5TC79 503 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 FCRLBQ6BAA4 426 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 RPTNQ6XPR3 784 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 DGLUCYQ7Z3D6 616 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 OR4N4Q8N0Y3 316 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 ZNF655Q8N720 491 aaPredicted RBP16.27■□□□□ 0.2
SCARF1-205ENST00000571272 TRAF4Q9BUZ4 470 aaPredicted RBP16.27■□□□□ 0.2
SCARF1-205ENST00000571272 OR52D1Q9H346 318 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 PIGUQ9H490 435 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 SCN2AQ99250 2005 aa16.27■□□□□ 0.2
SCARF1-205ENST00000571272 MDC1Q14676 2089 aaKnown RBP16.27■□□□□ 0.19
SCARF1-205ENST00000571272 CENPVL1A0A0U1RR11 272 aa16.27■□□□□ 0.19
SCARF1-205ENST00000571272 F3P13726 295 aa16.27■□□□□ 0.19
SCARF1-205ENST00000571272 PKLRP30613 574 aa16.27■□□□□ 0.19
SCARF1-205ENST00000571272 ACVR1BP36896 505 aa16.27■□□□□ 0.19
SCARF1-205ENST00000571272 CDC73Q6P1J9 531 aa16.27■□□□□ 0.19
SCARF1-205ENST00000571272 SLC48A1Q6P1K1 146 aa16.27■□□□□ 0.19
SCARF1-205ENST00000571272 CEACAM19Q7Z692 300 aa16.27■□□□□ 0.19
SCARF1-205ENST00000571272 OR8H3Q8N146 312 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms