RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 SH2D4BQ5SQS7 431 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 ZNF544Q6NX49 715 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 TMEM108Q6UXF1 575 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 PAGE2Q7Z2X7 111 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 PDIK1LQ8N165 341 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 METTL4Q8N3J2 472 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 GTPBP8Q8N3Z3 284 aaPredicted RBP9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 ERP27Q96DN0 273 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 RNF145Q96MT1 663 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 SRXN1Q9BYN0 137 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 BPESC1Q9GZL8 116 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 AHSPQ9NZD4 102 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 ACOT9Q9Y305 439 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 PMF1-BGLAPU3KQ54 211 aa9.19□□□□□ -0.94
CTDNEP1-202ENST00000570380 VWFP04275 2813 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 TMPRSS2O15393 492 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 NDUFB5O43674 189 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 ANGPTL1O95841 491 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 YES1P07947 543 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 DHRS4L1P0CG22 281 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 BMP4P12644 408 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 GGT1P19440 569 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 IGHV1-2P23083 117 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 PTAFRP25105 342 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 CD40P25942 277 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 SHC1P29353 583 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 IL2RGP31785 369 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 OR3A2P47893 321 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 ALDH9A1P49189 494 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 CLK3P49761 638 aaKnown RBP9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 ZNF83P51522 516 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 RAB10P61026 200 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 GALNT1Q10472 559 aaPredicted RBP9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 GTF2H2Q13888 395 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 CARTPTQ16568 116 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 ERCC6LQ2NKX8 1250 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 CYP27C1Q4G0S4 372 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 PDSS1Q5T2R2 415 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 CPTPQ5TA50 214 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 HIST2H2BDQ6DRA6 164 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 GTF2H2CQ6P1K8 395 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 SSX8Q7RTT4 187 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 COMMD6Q7Z4G1 85 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 P2RY8Q86VZ1 359 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 OR7G2Q8NG99 324 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 POC1BQ8TC44 478 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 GRK7Q8WTQ7 553 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 FAM216AQ8WUB2 273 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 KCTD4Q8WVF5 259 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 SLC9A6Q92581 669 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 LRRC39Q96DD0 335 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 MTBPQ96DY7 904 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 REXO5Q96IC2 774 aaKnown RBP9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 KLHL15Q96M94 604 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 SORCS2Q96PQ0 1159 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 CDK15Q96Q40 435 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 GPR22Q99680 433 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 INPP5KQ9BT40 448 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 METTL17Q9H7H0 456 aaPredicted RBP9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 IPPKQ9H8X2 491 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 GP6Q9HCN6 339 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 PFDN4Q9NQP4 134 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 NSMCE4AQ9NXX6 385 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 TAS2R9Q9NYW1 312 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 ING1Q9UK53 422 aaPredicted RBP9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 UTS2RQ9UKP6 389 aa9.18□□□□□ -0.94
CTDNEP1-202ENST00000570380 A0A087WZY1 265 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 A0A1W2PRB8 838 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 C7orf72A4D263 438 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 OR5H1A6NKK0 313 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 CXorf49A8MYA2 514 aaPredicted RBP9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 PLOD3O60568 738 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 RGS9O75916 674 aaPredicted RBP9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 PRKD3O94806 890 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 CLDN9O95484 217 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 IL33O95760 270 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 COX5AP20674 150 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 APOBEC3AP31941 199 aaPredicted RBP9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 SFTPDP35247 375 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 PRR5P85299 388 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 LGALS3BPQ08380 585 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 FASTKD3Q14CZ7 662 aaKnown RBP9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 ACAP2Q15057 778 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 DECR1Q16698 335 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 ZSWIM7Q19AV6 140 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 SWI5Q1ZZU3 235 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 MST1LQ2TV78 715 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 PLPPR5Q32ZL2 321 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 MIDNQ504T8 468 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 AWAT1Q58HT5 328 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 FRG2Q64ET8 278 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 DEF8Q6ZN54 512 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 RINLQ6ZS11 566 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 FCRLAQ7L513 359 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 GOLGA7Q7Z5G4 137 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 LILRA2Q8N149 483 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 LINC01356Q8N9X3 169 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 OR52N5Q8NH56 324 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 FAM110BQ8TC76 370 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 CPNE4Q96A23 557 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms