RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 POGLUT1Q8NBL1 392 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 OR6C4Q8NGE1 309 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 OR5T3Q8NGG3 340 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 PIGXQ8TBF5 258 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 TMEM163Q8TC26 289 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 FNDC8Q8TC99 324 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 SLC9A6Q92581 669 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 SLC41A3Q96GZ6 507 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 PLEKHA8Q96JA3 519 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 HS6ST2Q96MM7 605 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF582Q96NG8 517 aaPredicted RBP5□□□□□ -1.61
SF3B3-213ENST00000569687 IL4I1Q96RQ9 567 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 MGLLQ99685 303 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 MCHR1Q99705 422 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 CCDC3Q9BQI4 270 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 PRSS27Q9BQR3 290 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF559Q9BR84 538 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 TAPBPLQ9BX59 468 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 KLHL25Q9H0H3 589 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 QRSL1Q9H0R6 528 aaKnown RBP5□□□□□ -1.61
SF3B3-213ENST00000569687 MIR1-1HGQ9H1L0 117 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 MMP27Q9H306 513 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 ARMC7Q9H6L4 198 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 ANKRA2Q9H9E1 313 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 ERVMER34-1Q9H9K5 563 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 CACYBPQ9HB71 228 aaKnown RBP5□□□□□ -1.61
SF3B3-213ENST00000569687 AKIP1Q9NQ31 210 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 EQTNQ9NQ60 294 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 TBC1D23Q9NUY8 699 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 TOR4AQ9NXH8 423 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 SELENONQ9NZV5 590 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 PFDN2Q9UHV9 154 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 GPN3Q9UHW5 284 aaPredicted RBP5□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF223Q9UK11 482 aaPredicted RBP5□□□□□ -1.61
SF3B3-213ENST00000569687 DIMT1Q9UNQ2 313 aaKnown RBP5□□□□□ -1.61
SF3B3-213ENST00000569687 LSM2Q9Y333 95 aaKnown RBP5□□□□□ -1.61
SF3B3-213ENST00000569687 CLDN16Q9Y5I7 305 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 CSNK1G3Q9Y6M4 447 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 PMF1-BGLAPU3KQ54 211 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 A0A096LPE4 126 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 A0A1W2PPZ6 126 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 TRAPPC13A5PLN9 417 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 HTR3EA5X5Y0 456 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF860A6NHJ4 632 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 FIGNL2A6NMB9 653 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 KDM4EB2RXH2 506 aaPredicted RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 H3BMH7 237 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 TNFRSF10AO00220 468 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 CCRL2O00421 344 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 CLDN4O14493 209 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 PRODHO43272 600 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF749O43361 778 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 TLX2O43763 284 aaPredicted RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 PRKYO43930 277 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 BRINP1O60477 761 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 FOXD2O60548 495 aaPredicted RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 LDB3O75112 727 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 PTP4A3O75365 173 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 KCNK2O95069 426 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 NADKO95544 446 aaPredicted RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 ZBTB11O95625 1053 aaPredicted RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 RPLP0P05388 317 aaKnown RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 ADRA2AP08913 450 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 CT62P0C5K7 136 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 MSL3P1P0C860 447 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 GAAP10253 952 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 DBTP11182 482 aaKnown RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 CDH3P22223 829 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 GADD45AP24522 165 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 HOXA6P31267 233 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 GABRA3P34903 492 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 GPR3P46089 330 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 CLK1P49759 484 aaKnown RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 EMDP50402 254 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 NUDT6P53370 316 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 PSMD4P55036 377 aaKnown RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 CTBP2P56545 445 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 HSD17B7P56937 341 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 RGS8P57771 180 aaPredicted RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 PPP1CAP62136 330 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 NCS1P62166 190 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 SHC2P98077 582 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 BNC1Q01954 994 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 ID2Q02363 134 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 FUT7Q11130 342 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 RAB40BQ12829 278 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 TMED1Q13445 227 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 TPBGQ13641 420 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 SERTAD2Q14140 314 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 NR1D2Q14995 579 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 UBXN2BQ14CS0 331 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF141Q15928 474 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 SNAPC1Q16533 368 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 SYT16Q17RD7 645 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 TIMM50Q3ZCQ8 353 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 C14orf28Q4W4Y0 310 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 C3orf38Q5JPI3 329 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 DCST2Q5T1A1 773 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 AADACL4Q5VUY2 407 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF613Q6PF04 617 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms