RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 GATSQ8NAP1 163 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 FAM110BQ8TC76 370 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 ZNF524Q96C55 264 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 REEP4Q9H6H4 257 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 EML4Q9HC35 981 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 KLHL28Q9NXS3 571 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 SLC28A1O00337 649 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 OIP5O43482 229 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 TYROBPO43914 113 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 TNFRSF21O75509 655 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 SMNDC1O75940 238 aaKnown RBP eCLIP12.44□□□□□ -0.421e-7■■■□□ 18.1
GTF3C1-211ENST00000569653 OXSR1O95747 527 aaPredicted RBP12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 MYZAPP0CAP1 466 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 PRPS2P11908 318 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 IL11P20809 199 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 SERPINB5P36952 375 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 GANABQ14697 944 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 PON3Q15166 354 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 CTU2Q2VPK5 515 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 TNFAIP8L3Q5GJ75 292 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 CCNJQ5T5M9 372 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 MFSD12Q6NUT3 480 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 FIGNL1Q6PIW4 674 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 LRIG3Q6UXM1 1119 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 METTL25Q8N6Q8 603 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 POC1BQ8TC44 478 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 GPR151Q8TDV0 419 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 SMPDL3BQ92485 455 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 SLC9A6Q92581 669 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 PGM2Q96G03 612 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 METTL2AQ96IZ6 378 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 ADGRG7Q96K78 797 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 C3orf30Q96M34 536 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 HS3ST6Q96QI5 342 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 SMR3AQ99954 134 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 YIPF4Q9BSR8 244 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 ACBD3Q9H3P7 528 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 CENPHQ9H3R5 247 aa12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 SSU72Q9NP77 194 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-211ENST00000569653 ALG1L2C9J202 215 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 PIP5K1BO14986 540 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 RGS14O43566 566 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 KCNK2O95069 426 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 OPN1LWP04000 364 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 CRHP06850 196 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 NEFHP12036 1026 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 BCKDHAP12694 445 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 SHC1P29353 583 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 HOXC12P31275 282 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 CD79BP40259 229 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 RNF144AP50876 292 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 PRKAG1P54619 331 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 CD226Q15762 336 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 XKR7Q5GH72 579 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 ARL13AQ5H913 290 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 ZCCHC23Q6ZST2 131 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 ZNF550Q7Z398 422 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 P4HA3Q7Z4N8 544 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 MEIOBQ8N635 442 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 ZNF610Q8N9Z0 462 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 CHDHQ8NE62 594 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 NUP43Q8NFH3 380 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 OR7A2PQ8NGA2 310 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 TWIST2Q8WVJ9 160 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 PPCDCQ96CD2 204 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 FAM120BQ96EK7 910 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 MS4A4EQ96PG1 132 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 TBL1XR1Q9BZK7 514 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 VDAC3Q9Y277 283 aa12.43□□□□□ -0.42
GTF3C1-211ENST00000569653 USF3Q68DE3 2245 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 DNHD1Q96M86 4753 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 TM9SF1O15321 606 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 EMC8O43402 210 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 EFNA2O43921 213 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 BPGMP07738 259 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 NGFRP08138 427 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 NID1P14543 1247 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 GPC1P35052 558 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 UGT2B10P36537 528 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 C17orf67Q0P5P2 114 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 KEAP1Q14145 624 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 CASP8Q14790 479 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 ZNHIT3Q15649 155 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 PLPPR5Q32ZL2 321 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 GALNTL6Q49A17 601 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 GLYR1Q49A26 553 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 FBXW10Q5XX13 1052 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 CAMKMTQ7Z624 323 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 LSRQ86X29 649 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 CDRT4Q8N9R6 151 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 OR6Y1Q8NGX8 325 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 PPP1R14CQ8TAE6 165 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 AGR3Q8TD06 166 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 SDHAF3Q9NRP4 125 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 ACSS1Q9NUB1 689 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 SH3BP4Q9P0V3 963 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 CLEC4AQ9UMR7 237 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 ZNF175Q9Y473 711 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 ACTL7BQ9Y614 415 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms