RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 MYO1GB0I1T2 1018 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 C9JVG2 144 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 BCAS2O75934 225 aaPredicted RBP13.21□□□□□ -0.29
USB1-214ENST00000568848 CD3EP07766 207 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 FCGR2AP12318 317 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 EFNA1P20827 205 aaPredicted RBP13.21□□□□□ -0.29
USB1-214ENST00000568848 PSMA4P25789 261 aaKnown RBP13.21□□□□□ -0.29
USB1-214ENST00000568848 TRA2BP62995 288 aaKnown RBP13.21□□□□□ -0.29
USB1-214ENST00000568848 CLCQ05315 142 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 SPOCK1Q08629 439 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 DECR1Q16698 335 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 CHRFAM7AQ494W8 412 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 ZNF672Q499Z4 452 aaPredicted RBP13.21□□□□□ -0.29
USB1-214ENST00000568848 C6orf52Q5T4I8 152 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 HBMQ6B0K9 141 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 TFAP2EQ6VUC0 442 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 ZNF551Q7Z340 670 aaPredicted RBP13.21□□□□□ -0.29
USB1-214ENST00000568848 TUSC5Q8IXB3 177 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 OR4C3Q8NH37 302 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 OR2V1Q8NHB1 315 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 TMEM158Q8WZ71 300 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 ZNF775Q96BV0 537 aaPredicted RBP13.21□□□□□ -0.29
USB1-214ENST00000568848 TMEM237Q96Q45 408 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 TACO1Q9BSH4 297 aaKnown RBP13.21□□□□□ -0.29
USB1-214ENST00000568848 GIMAP4Q9NUV9 329 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 DDX18Q9NVP1 670 aaKnown RBP13.21□□□□□ -0.29
USB1-214ENST00000568848 PRSS50Q9UI38 385 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 ABCG2Q9UNQ0 655 aa13.21□□□□□ -0.29
USB1-214ENST00000568848 C19orf53Q9UNZ5 99 aaPredicted RBP13.21□□□□□ -0.29
USB1-214ENST00000568848 MALRD1Q5VYJ5 2156 aa13.21□□□□□ -0.3
USB1-214ENST00000568848 NPIPA5A0A0B4J1W7 369 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 A0A1W2PRB8 838 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 FAM234BA2RU67 622 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 NPIPA7E9PJI5 369 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 NDUFB5O43674 189 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 EFNA2O43921 213 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 SUPT7LO94864 414 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 PSMG1O95456 288 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 SYNGR4O95473 234 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 ADAP00813 363 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 RBP1P09455 135 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 ANXA4P09525 319 aaPredicted RBP13.2□□□□□ -0.3
USB1-214ENST00000568848 NPIPA8P0DM63 369 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 PPP3CBP16298 524 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 PSMB1P20618 241 aaKnown RBP13.2□□□□□ -0.3
USB1-214ENST00000568848 ACSM2AQ08AH3 577 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 FGFBP1Q14512 234 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 CD226Q15762 336 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 PLPPR5Q32ZL2 321 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 NDUFAF6Q330K2 333 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 CYP27C1Q4G0S4 372 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 CCNJQ5T5M9 372 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 ACSM2BQ68CK6 577 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 BEND4Q6ZU67 534 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 GABRG1Q8N1C3 465 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 MNS1Q8NEH6 495 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 ATP6V1C2Q8NEY4 427 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 CIDECQ96AQ7 238 aaPredicted RBP13.2□□□□□ -0.3
USB1-214ENST00000568848 TRAF4Q9BUZ4 470 aaPredicted RBP13.2□□□□□ -0.3
USB1-214ENST00000568848 MANSC1Q9H8J5 431 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 SDHAF3Q9NRP4 125 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 MED17Q9NVC6 651 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 NPAP1Q9NZP6 1156 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 MCTS1Q9ULC4 181 aaKnown RBP13.2□□□□□ -0.3
USB1-214ENST00000568848 GPR52Q9Y2T5 361 aa13.2□□□□□ -0.3
USB1-214ENST00000568848 IGLV3-32A0A0A0MS00 114 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 ZNF814B7Z6K7 855 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 TRIM49D1C9J1S8 452 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 TLX2O43763 284 aaPredicted RBP13.19□□□□□ -0.3
USB1-214ENST00000568848 COQ9O75208 318 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 LYZL6O75951 148 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 LY6HO94772 140 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 THBS1P07996 1170 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 ACP2P11117 423 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 ZNF16P17020 682 aaPredicted RBP13.19□□□□□ -0.3
USB1-214ENST00000568848 IL32P24001 234 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 HMOX2P30519 316 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 PRIM2P49643 509 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 IRX1P78414 480 aaPredicted RBP13.19□□□□□ -0.3
USB1-214ENST00000568848 MRPS22P82650 360 aaKnown RBP13.19□□□□□ -0.3
USB1-214ENST00000568848 SLC18A2Q05940 514 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 FOXF1Q12946 379 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 HSPB3Q12988 150 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 STK11Q15831 433 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 METTL2BQ6P1Q9 378 aaKnown RBP13.19□□□□□ -0.3
USB1-214ENST00000568848 GPRIN3Q6ZVF9 776 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 WDR75Q8IWA0 830 aaKnown RBP13.19□□□□□ -0.3
USB1-214ENST00000568848 BANPQ8N9N5 519 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 METTL6Q8TCB7 284 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 OSTF1Q92882 214 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 ELP4Q96EB1 424 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 TRMT61AQ96FX7 289 aaKnown RBP13.19□□□□□ -0.3
USB1-214ENST00000568848 EGLN2Q96KS0 407 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 AMDHD1Q96NU7 426 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 LMF2Q9BU23 707 aaKnown RBP13.19□□□□□ -0.3
USB1-214ENST00000568848 TRIM2Q9C040 744 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 CDC42EP4Q9H3Q1 356 aaKnown RBP13.19□□□□□ -0.3
USB1-214ENST00000568848 ACSS3Q9H6R3 686 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 Q9N2J8 555 aa13.19□□□□□ -0.3
USB1-214ENST00000568848 TMEM216Q9P0N5 145 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms