RNA–Protein interactions for RNA: ENST00000567269.5

CDH16-206, Transcript of cadherin 16, humanhuman

TSL 2

Gene CDH16, Length 3,539 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-206ENST00000567269 IDUAP35475 653 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 HNRNPKP61978 463 aaKnown RBP eCLIP11.24□□□□□ -0.61
CDH16-206ENST00000567269 ZNF846Q147U1 533 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 CLPPQ16740 277 aaPredicted RBP11.24□□□□□ -0.61
CDH16-206ENST00000567269 KLHL12Q53G59 568 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 SYT14P1Q58G82 188 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 PRAMEF8Q5VWM4 474 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 PRAMEF7Q5VXH5 474 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 TRUB1Q8WWH5 349 aaKnown RBP11.24□□□□□ -0.61
CDH16-206ENST00000567269 HLA-CQ95604 372 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 SAMD8Q96LT4 415 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 PDE7BQ9NP56 450 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 KRCC1Q9NPI7 259 aaPredicted RBP11.24□□□□□ -0.61
CDH16-206ENST00000567269 WDR70Q9NW82 654 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 UCKL1Q9NWZ5 548 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 CNOT2Q9NZN8 540 aaKnown RBP11.24□□□□□ -0.61
CDH16-206ENST00000567269 DAPK2Q9UIK4 370 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 ZDBF2Q9HCK1 2354 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 ATP1B1P05026 303 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 DBIP07108 87 aaKnown RBP11.24□□□□□ -0.61
CDH16-206ENST00000567269 DCNP07585 359 aaKnown RBP11.24□□□□□ -0.61
CDH16-206ENST00000567269 OCM2P0CE71 109 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 OCMP0CE72 109 aaPredicted RBP11.24□□□□□ -0.61
CDH16-206ENST00000567269 NOS3P29474 1203 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 GCGRP47871 477 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 RACK1P63244 317 aaKnown RBP11.24□□□□□ -0.61
CDH16-206ENST00000567269 PRICKLE4Q2TBC4 344 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 TRIM16LQ309B1 348 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 SLC46A3Q7Z3Q1 461 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 ZAR1Q86SH2 424 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 LHFPL3Q86UP9 236 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 IGFN1Q86VF2 1251 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 KIF18BQ86Y91 864 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 GATSQ8NAP1 163 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 KBTBD8Q8NFY9 601 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 OR51A7Q8NH64 312 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 FNDC8Q8TC99 324 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 MSANTD3Q96H12 275 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 PTCHD1Q96NR3 888 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.24□□□□□ -0.61
CDH16-206ENST00000567269 ATP13A2Q9NQ11 1180 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 PNO1Q9NRX1 252 aaKnown RBP11.24□□□□□ -0.61
CDH16-206ENST00000567269 ERVK-19Q9WJR5 959 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 DSPPQ9NZW4 1301 aa11.24□□□□□ -0.61
CDH16-206ENST00000567269 PLOD3O60568 738 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 SERPINI2O75830 405 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 ADRA2AP08913 450 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 TSPAN19P0C672 248 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 HPGDP15428 266 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 TCEA1P23193 301 aaKnown RBP11.23□□□□□ -0.61
CDH16-206ENST00000567269 PSMA1P25786 263 aaKnown RBP11.23□□□□□ -0.61
CDH16-206ENST00000567269 CAPZBP47756 277 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 OR1D4P47884 311 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 CD300CQ08708 224 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 TSPAN31Q12999 210 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 RGS21Q2M5E4 152 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 TIMM50Q3ZCQ8 353 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 PRAMEF17Q5VTA0 474 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 ZNF367Q7RTV3 350 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 SPACA7Q96KW9 195 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 ART5Q96L15 291 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 CEP19Q96LK0 163 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 ARHGDIGQ99819 225 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 KCNS3Q9BQ31 491 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 PSD2Q9BQI7 771 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 NUAK2Q9H093 628 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 TMEM27Q9HBJ8 222 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 LRIT1Q9P2V4 623 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 SPIN1Q9Y657 262 aaPredicted RBP11.23□□□□□ -0.61
CDH16-206ENST00000567269 IGHV5-51A0A0C4DH38 117 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 SMIM30A4D0T7 59 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 ARHGAP33O14559 1287 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 KIAA0513O60268 411 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 NME1P15531 152 aaKnown RBP11.23□□□□□ -0.61
CDH16-206ENST00000567269 CSTF2P33240 577 aaKnown RBP eCLIP11.23□□□□□ -0.61
CDH16-206ENST00000567269 CDH11P55287 796 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 SNRPGP62308 76 aaKnown RBP11.23□□□□□ -0.61
CDH16-206ENST00000567269 BNC1Q01954 994 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 OR1Q1Q15612 314 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 ZNF404Q494X3 552 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 MANEAQ5SRI9 462 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 OR2G6Q5TZ20 316 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 USP43Q70EL4 1123 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 OR52L1Q8NGH7 329 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 OR8D4Q8NGM9 314 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 DYNC2LI1Q8TCX1 351 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 ANKRD9Q96BM1 317 aaPredicted RBP11.23□□□□□ -0.61
CDH16-206ENST00000567269 RNFT2Q96EX2 444 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 SPRTNQ9H040 489 aaPredicted RBP11.23□□□□□ -0.61
CDH16-206ENST00000567269 ABCB10Q9NRK6 738 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 NLGN3Q9NZ94 848 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 TRAPPC13A5PLN9 417 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 SLC35E2P0CK97 266 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 S100A1P23297 94 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 C12orf73Q69YU5 71 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 ZFP41Q8N8Y5 198 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 ANKK1Q8NFD2 765 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 PFN4Q8NHR9 129 aa11.23□□□□□ -0.61
CDH16-206ENST00000567269 CNOT9Q92600 299 aaKnown RBP11.23□□□□□ -0.61
CDH16-206ENST00000567269 TCTN2Q96GX1 697 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms