RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 GABRA3P34903 492 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 C2orf80Q0P641 193 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 RASA2Q15283 850 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 SPIN4Q56A73 249 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 GPRIN3Q6ZVF9 776 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 EXOC3L1Q86VI1 746 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 OR2V1Q8NHB1 315 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 FBXO30Q8TB52 745 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 TRMT61AQ96FX7 289 aaKnown RBP13.8□□□□□ -0.2
PALB2-205ENST00000567003 TMEM237Q96Q45 408 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 ZNF382Q96SR6 550 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 PAFAH2Q99487 392 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 LMF2Q9BU23 707 aaKnown RBP13.8□□□□□ -0.2
PALB2-205ENST00000567003 ZDHHC18Q9NUE0 388 aa13.8□□□□□ -0.2
PALB2-205ENST00000567003 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.79□□□□□ -0.27e-9■■■□□ 15.2
PALB2-205ENST00000567003 A0A1W2PP18 115 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 A0A1W2PRB8 838 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 PHF1O43189 567 aaPredicted RBP13.79□□□□□ -0.2
PALB2-205ENST00000567003 TLX2O43763 284 aaPredicted RBP13.79□□□□□ -0.2
PALB2-205ENST00000567003 GPRIN2O60269 458 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 IFNA2P01563 188 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 TUBBP07437 444 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 CD3EP07766 207 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 ZNF17P17021 662 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 PTNP21246 168 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 PSMA4P25789 261 aaKnown RBP13.79□□□□□ -0.2
PALB2-205ENST00000567003 PHBP35232 272 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 PRR5P85299 388 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 C17orf67Q0P5P2 114 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 TAB1Q15750 504 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 PGGHGQ32M88 737 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 ZNF672Q499Z4 452 aaPredicted RBP13.79□□□□□ -0.2
PALB2-205ENST00000567003 ZNF678Q5SXM1 525 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 NCMAPQ5T1S8 102 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 HBMQ6B0K9 141 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 ADAM5Q6NVV9 412 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 FIGNL1Q6PIW4 674 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 NUFIP2Q7Z417 695 aaKnown RBP13.79□□□□□ -0.2
PALB2-205ENST00000567003 ZAR1Q86SH2 424 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 STK32CQ86UX6 486 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 WDR75Q8IWA0 830 aaKnown RBP13.79□□□□□ -0.2
PALB2-205ENST00000567003 OR2L13Q8N349 312 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 GTPBP8Q8N3Z3 284 aaPredicted RBP13.79□□□□□ -0.2
PALB2-205ENST00000567003 POC1BQ8TC44 478 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 ABHD3Q8WU67 409 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 C11orf24Q96F05 449 aaPredicted RBP13.79□□□□□ -0.2
PALB2-205ENST00000567003 SH3YL1Q96HL8 342 aaPredicted RBP13.79□□□□□ -0.2
PALB2-205ENST00000567003 MED17Q9NVC6 651 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 FBXO34Q9NWN3 711 aa13.79□□□□□ -0.2
PALB2-205ENST00000567003 POLR3HQ9Y535 204 aaPredicted RBP13.79□□□□□ -0.2
PALB2-205ENST00000567003 POC1B-GALNT4F8VUJ3 575 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 ADAMDEC1O15204 470 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 COL6A2P12110 1019 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 NTSP30990 170 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 BSPH1Q075Z2 132 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 ZNF763Q0D2J5 394 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 ZNHIT3Q15649 155 aaPredicted RBP13.78□□□□□ -0.2
PALB2-205ENST00000567003 ETFDHQ16134 617 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 PLPPR5Q32ZL2 321 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 FAM71E1Q6IPT2 247 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 GALNT18Q6P9A2 607 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 SEZ6L2Q6UXD5 910 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 TFAP2EQ6VUC0 442 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 DNM1P46Q6ZS02 220 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 STEAP2Q8NFT2 490 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 TMEM158Q8WZ71 300 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 ELP4Q96EB1 424 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 AMDHD1Q96NU7 426 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 SRXN1Q9BYN0 137 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 OR10A4Q9H209 315 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 FANCFQ9NPI8 374 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 MIEF1Q9NQG6 463 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 MRTO4Q9UKD2 239 aaKnown RBP13.78□□□□□ -0.2
PALB2-205ENST00000567003 PLCE1Q9P212 2302 aa13.78□□□□□ -0.2
PALB2-205ENST00000567003 IGHV4-30-2A0A087WSY4 118 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 DPRXA6NFQ7 191 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 A8MV72 311 aaPredicted RBP13.77□□□□□ -0.21
PALB2-205ENST00000567003 DLX3O60479 287 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 OXSR1O95747 527 aaPredicted RBP13.77□□□□□ -0.21
PALB2-205ENST00000567003 CD8AP01732 235 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 THBS1P07996 1170 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 IL32P24001 234 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 SFTPDP35247 375 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 RNF144AP50876 292 aaPredicted RBP13.77□□□□□ -0.21
PALB2-205ENST00000567003 FOXA1P55317 472 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 SLC18A2Q05940 514 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 CHRFAM7AQ494W8 412 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 SPDYAQ5MJ70 313 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 ESPNLQ6ZVH7 1005 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 ZNF551Q7Z340 670 aaPredicted RBP13.77□□□□□ -0.21
PALB2-205ENST00000567003 TUSC5Q8IXB3 177 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 GABRG1Q8N1C3 465 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 OR4C3Q8NH37 302 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 GPR151Q8TDV0 419 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 DCAKDQ8WVC6 231 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 OSTF1Q92882 214 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 OTUB1Q96FW1 271 aaPredicted RBP13.77□□□□□ -0.21
PALB2-205ENST00000567003 HS6ST2Q96MM7 605 aa13.77□□□□□ -0.21
PALB2-205ENST00000567003 CDC42EP4Q9H3Q1 356 aaKnown RBP13.77□□□□□ -0.21
PALB2-205ENST00000567003 ESRP2Q9H6T0 727 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms