RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 A0A1W2PPL8 197 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 GSTZ1O43708 216 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-215ENST00000566843 TSPAN9O75954 239 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 RECQLP46063 649 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-215ENST00000566843 TRA2BP62995 288 aaKnown RBP14.64□□□□□ -0.07
COMMD4-215ENST00000566843 ARSIQ5FYB1 569 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 PXKQ7Z7A4 578 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 CPOQ8IVL8 374 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 GID4Q8IVV7 300 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 OR2T4Q8NH00 348 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 OR56B4Q8NH76 319 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 SFXN5Q8TD22 340 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 FAIM2Q9BWQ8 316 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 REG4Q9BYZ8 158 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 ZNF436Q9C0F3 470 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-215ENST00000566843 CSNK1G3Q9Y6M4 447 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 PLPP2O43688 288 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 MTRF1O75570 445 aaKnown RBP14.63□□□□□ -0.07
COMMD4-215ENST00000566843 CD3GP09693 182 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 ZP3P21754 424 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 CCR6P51684 374 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 ARFIP1P53367 373 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 DGCR2P98153 550 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 PITPNAQ00169 270 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 CRYZQ08257 329 aaKnown RBP14.63□□□□□ -0.07
COMMD4-215ENST00000566843 DYRK1AQ13627 763 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 KLF9Q13886 244 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-215ENST00000566843 PIP5KL1Q5T9C9 394 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 CXXC5Q7LFL8 322 aaKnown RBP14.63□□□□□ -0.07
COMMD4-215ENST00000566843 RRM2BQ7LG56 351 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 NLRC3Q7RTR2 1065 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 SZRD1Q7Z422 152 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 UBE3DQ7Z6J8 389 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 TEX19Q8NA77 164 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 SRFBP1Q8NEF9 429 aaKnown RBP14.63□□□□□ -0.07
COMMD4-215ENST00000566843 OR51G2Q8NGK0 314 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 OR5W2Q8NH69 310 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 KLHL15Q96M94 604 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 ERMAPQ96PL5 475 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-215ENST00000566843 AIF1LQ9BQI0 150 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 TRIM36Q9NQ86 728 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 WASH6PQ9NQA3 447 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 GPR55Q9Y2T6 319 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-215ENST00000566843 NPFFR2Q9Y5X5 522 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 hCG_1807616A0A1W2PRN6 198 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 CPSF4LA6NMK7 179 aaKnown RBP14.63□□□□□ -0.07
COMMD4-215ENST00000566843 SC5DO75845 299 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 ALPPL2P10696 532 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 ATF4P18848 351 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-215ENST00000566843 VSX2P58304 361 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-215ENST00000566843 REEP5Q00765 189 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 DHODHQ02127 395 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 SLC25A35Q3KQZ1 300 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 FAM27D1Q5T7N8 215 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 ZNF697Q5TEC3 545 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 GARNL3Q5VVW2 1013 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 SLC22A10Q63ZE4 541 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 WASH2PQ6VEQ5 465 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 GAREM2Q75VX8 874 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 TRMT11Q7Z4G4 463 aaKnown RBP14.63□□□□□ -0.07
COMMD4-215ENST00000566843 ADCK2Q7Z695 626 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 DEFB128Q7Z7B8 93 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 C17orf64Q86WR6 236 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 NKAIN4Q8IVV8 208 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 TMEM99Q8N816 258 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 OR2T33Q8NG76 320 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 ABHD4Q8TB40 342 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 RGMAQ96B86 450 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 LINC00615Q96LM1 132 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-215ENST00000566843 C12orf66Q96MD2 445 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 DPEP2Q9H4A9 486 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 MED9Q9NWA0 146 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 POMT2Q9UKY4 750 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 SCML1Q9UN30 329 aa14.63□□□□□ -0.07
COMMD4-215ENST00000566843 C17orf113A0A1B0GUU1 675 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 M0R233 179 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 LEFTY2O00292 366 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 CTDSPLO15194 276 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 NDUFS4O43181 175 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 SOD2P04179 222 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 SERPIND1P05546 499 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 ANKRD34CP0C6C1 535 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 TBXA2RP21731 343 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 GABRR2P28476 465 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 LCN1P31025 176 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 TRHRP34981 398 aaPredicted RBP14.62□□□□□ -0.07
COMMD4-215ENST00000566843 ZNF311Q5JNZ3 666 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 NIPAL3Q6P499 406 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 KIAA1324Q6UXG2 1013 aaKnown RBP14.62□□□□□ -0.07
COMMD4-215ENST00000566843 BAIAP2L2Q6UXY1 529 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 MEPCEQ7L2J0 689 aaKnown RBP14.62□□□□□ -0.07
COMMD4-215ENST00000566843 RPLP0P6Q8NHW5 317 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 LCORQ96JN0 433 aaPredicted RBP14.62□□□□□ -0.07
COMMD4-215ENST00000566843 RBCK1Q9BYM8 510 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 SLC35C2Q9NQQ7 365 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 INPP5EQ9NRR6 644 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 CHST2Q9Y4C5 530 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.62□□□□□ -0.07
COMMD4-215ENST00000566843 A8MUA0 341 aa14.62□□□□□ -0.07
COMMD4-215ENST00000566843 LRRN3E7EW58 273 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms