RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 MDKP21741 143 aaPredicted RBP2.75□□□□□ -1.97
PALB2-203ENST00000565038 GNPDA1P46926 289 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 RPL29P47914 159 aaKnown RBP2.75□□□□□ -1.97
PALB2-203ENST00000565038 MRPS11P82912 194 aaKnown RBP2.75□□□□□ -1.97
PALB2-203ENST00000565038 OC90Q02509 493 aaPredicted RBP2.75□□□□□ -1.97
PALB2-203ENST00000565038 EXOSC2Q13868 293 aaKnown RBP2.75□□□□□ -1.97
PALB2-203ENST00000565038 NEK5Q6P3R8 708 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 IL34Q6ZMJ4 242 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 TIFABQ6ZNK6 161 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 HSD11B1LQ7Z5J1 315 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 SERPINA9Q86WD7 417 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 RNF148Q8N7C7 305 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 MINDY2Q8NBR6 621 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 OR2A12Q8NGT7 310 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 ANKRD49Q8WVL7 239 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 COMMD4Q9H0A8 199 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 OR51J1Q9H342 316 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 GLIPR2Q9H4G4 154 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 COG4Q9H9E3 785 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 FANCFQ9NPI8 374 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 ANKMY1Q9P2S6 941 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 GALPQ9UBC7 116 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 SPASTQ9UBP0 616 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.75□□□□□ -1.97
PALB2-203ENST00000565038 ABCC4O15439 1325 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 WASHC1A8K0Z3 465 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 TRIM3O75382 744 aaPredicted RBP2.74□□□□□ -1.97
PALB2-203ENST00000565038 HPNP05981 417 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 NR2C1P13056 603 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 ETS1P14921 441 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 ZNF17P17021 662 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 CDKN3Q16667 212 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 LRRC36Q1X8D7 754 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 ZNF658BQ4V348 819 aaPredicted RBP2.74□□□□□ -1.97
PALB2-203ENST00000565038 DCST2Q5T1A1 773 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 METTL11BQ5VVY1 283 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 OR8G2PQ6IF36 304 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 SULT1C3Q6IMI6 304 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 SCYL2Q6P3W7 929 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 ZNF589Q86UQ0 364 aaPredicted RBP2.74□□□□□ -1.97
PALB2-203ENST00000565038 MKXQ8IYA7 352 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 RNF175Q8N4F7 328 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 UPRTQ96BW1 309 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 FGGYQ96C11 551 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 NMNAT2Q9BZQ4 307 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 POLR3FQ9H1D9 316 aaPredicted RBP2.74□□□□□ -1.97
PALB2-203ENST00000565038 SLC25A51Q9H1U9 297 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 ROPN1Q9HAT0 212 aaPredicted RBP2.74□□□□□ -1.97
PALB2-203ENST00000565038 YAE1D1Q9NRH1 226 aa2.74□□□□□ -1.97
PALB2-203ENST00000565038 PAK1IP1Q9NWT1 392 aaPredicted RBP2.74□□□□□ -1.97
PALB2-203ENST00000565038 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.74□□□□□ -1.97
PALB2-203ENST00000565038 SAMD4AQ9UPU9 718 aaKnown RBP2.74□□□□□ -1.97
PALB2-203ENST00000565038 EIF3LQ9Y262 564 aaKnown RBP2.74□□□□□ -1.97
PALB2-203ENST00000565038 SMIM28A0A1B0GU29 152 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 LRRC30A6NM36 301 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 MT-ND3P03897 115 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 ANXA3P12429 323 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 ZNF32P17041 273 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 GABRR1P24046 479 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 EGFEM1PQ0D2K5 195 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 ST3GAL3Q11203 375 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 GAMTQ14353 236 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 AANATQ16613 207 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 PVRIGQ6DKI7 326 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 PPP1R27Q86WC6 154 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 EFCAB13Q8IY85 973 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 ZNF100Q8IYN0 542 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 ELMOD2Q8IZ81 293 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 FAM9BQ8IZU0 186 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 ALLCQ8N6M5 410 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 ZSCAN4Q8NAM6 433 aaPredicted RBP2.73□□□□□ -1.97
PALB2-203ENST00000565038 ZBTB44Q8NCP5 570 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 STKLD1Q8NE28 680 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 ANKRD20A12PQ8NF67 263 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 OR56B1Q8NGI3 324 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 DCUN1D4Q92564 292 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 SMIM14Q96QK8 99 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 MARCH5Q9NX47 278 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 XPO7Q9UIA9 1087 aaKnown RBP2.73□□□□□ -1.97
PALB2-203ENST00000565038 MOSPD1Q9UJG1 213 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 KNSTRNQ9Y448 316 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 USP16Q9Y5T5 823 aa2.73□□□□□ -1.97
PALB2-203ENST00000565038 UBE4BO95155 1302 aa2.72□□□□□ -1.97
PALB2-203ENST00000565038 FAM74A7A6NL05 159 aa2.72□□□□□ -1.97
PALB2-203ENST00000565038 WASH3PC4AMC7 463 aa2.72□□□□□ -1.97
PALB2-203ENST00000565038 TRIM49D1C9J1S8 452 aa2.72□□□□□ -1.97
PALB2-203ENST00000565038 SSX5O60225 188 aa2.72□□□□□ -1.97
PALB2-203ENST00000565038 STX11O75558 287 aa2.72□□□□□ -1.97
PALB2-203ENST00000565038 TGFAP01135 160 aa2.72□□□□□ -1.97
PALB2-203ENST00000565038 CHRNA1P02708 482 aa2.72□□□□□ -1.97
PALB2-203ENST00000565038 IGLL1P15814 213 aa2.72□□□□□ -1.97
PALB2-203ENST00000565038 H2AFXP16104 143 aaPredicted RBP2.72□□□□□ -1.97
PALB2-203ENST00000565038 GCKP35557 465 aa2.72□□□□□ -1.97
PALB2-203ENST00000565038 CYLC1P35663 651 aaPredicted RBP2.72□□□□□ -1.97
PALB2-203ENST00000565038 TLE4Q04727 773 aa2.72□□□□□ -1.97
PALB2-203ENST00000565038 ZNF630Q2M218 657 aaPredicted RBP2.72□□□□□ -1.97
PALB2-203ENST00000565038 FAM74A3Q4VXF1 159 aa2.72□□□□□ -1.97
PALB2-203ENST00000565038 WASH2PQ6VEQ5 465 aa2.72□□□□□ -1.97
PALB2-203ENST00000565038 LANCL3Q6ZV70 420 aa2.72□□□□□ -1.97
PALB2-203ENST00000565038 LRRC70Q7Z2Q7 622 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms