RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 KLF11O14901 512 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 ANKRD28O15084 1053 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 CPSF4O95639 269 aaKnown RBP16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 MATN1P21941 496 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 S100A3P33764 101 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 LHX2P50458 406 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 NME5P56597 212 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 DCST2Q5T1A1 773 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 CHMP1BQ7LBR1 199 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 GDF7Q7Z4P5 450 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 C6orf120Q7Z4R8 191 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 ZAR1Q86SH2 424 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 MISPQ8IVT2 679 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 GATSQ8NAP1 163 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 GOT1L1Q8NHS2 421 aaPredicted RBP16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 PIWIL2Q8TC59 973 aaKnown RBP16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 OR7D2Q96RA2 312 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 TUBA1CQ9BQE3 449 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 PIGQQ9BRB3 760 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 HOXD1Q9GZZ0 328 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 AIG1Q9NVV5 245 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 MED12Q93074 2177 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 ITPR3Q14573 2671 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 KIAA1549Q9HCM3 1950 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 IGLV3-32A0A0A0MS00 114 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 RNF103-CHMP3A0A140T963 221 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 MBD3L4A6NDZ8 208 aaPredicted RBP16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 MBD3L3A6NE82 208 aaPredicted RBP16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 MBD3L5A6NJ08 208 aaPredicted RBP16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 E9PBE3 544 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 LINC01387J3KSC0 135 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 ALDOCP09972 364 aaKnown RBP16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 PEPDP12955 493 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 BMP5P22003 454 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 MSX1P28360 303 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 B3GALT5-AS1P59052 145 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 UFM1P61960 85 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 TFF3Q07654 80 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 BCL2A1Q16548 175 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 FAM174BQ3ZCQ3 159 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 GLYR1Q49A26 553 aaPredicted RBP16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 SPANXN4Q5MJ08 99 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 ANKRD46Q86W74 232 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 ZNF527Q8NB42 609 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 NAXEQ8NCW5 288 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 MBD3L2Q8NHZ7 208 aaPredicted RBP16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 SLC35G5Q96KT7 338 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 ZBTB18Q99592 522 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 ZNF629Q9UEG4 869 aaPredicted RBP16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 KCNE3Q9Y6H6 103 aa16.61■□□□□ 0.25
SYNGR3-204ENST00000564642 A0A1W2PQD3 144 aa16.6■□□□□ 0.25
SYNGR3-204ENST00000564642 SCN2BO60939 215 aa16.6■□□□□ 0.25
SYNGR3-204ENST00000564642 ZNF708P17019 499 aa16.6■□□□□ 0.25
SYNGR3-204ENST00000564642 POU3F2P20265 443 aaPredicted RBP16.6■□□□□ 0.25
SYNGR3-204ENST00000564642 UQCRC2P22695 453 aa16.6■□□□□ 0.25
SYNGR3-204ENST00000564642 DGKQP52824 942 aa16.6■□□□□ 0.25
SYNGR3-204ENST00000564642 CLDN18P56856 261 aa16.6■□□□□ 0.25
SYNGR3-204ENST00000564642 PHC1P78364 1004 aa16.6■□□□□ 0.25
SYNGR3-204ENST00000564642 CLEC4FQ8N1N0 589 aa16.6■□□□□ 0.25
SYNGR3-204ENST00000564642 OR5D16Q8NGK9 328 aa16.6■□□□□ 0.25
SYNGR3-204ENST00000564642 LRRC8CQ8TDW0 803 aa16.6■□□□□ 0.25
SYNGR3-204ENST00000564642 LRRC46Q96FV0 321 aa16.6■□□□□ 0.25
SYNGR3-204ENST00000564642 TM9SF2Q99805 663 aa16.6■□□□□ 0.25
SYNGR3-204ENST00000564642 NPDC1Q9NQX5 325 aaPredicted RBP16.6■□□□□ 0.25
SYNGR3-204ENST00000564642 VDAC3Q9Y277 283 aa16.6■□□□□ 0.25
SYNGR3-204ENST00000564642 ZNF337Q9Y3M9 751 aa16.6■□□□□ 0.25
SYNGR3-204ENST00000564642 OR2M5A3KFT3 312 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 CLCA1A8K7I4 914 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 H3BML4 177 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 H3BNH8 94 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 CTSSP25774 331 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 ZNF136P52737 540 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 EEFSECP57772 596 aaKnown RBP16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 RPS26P62854 115 aaKnown RBP16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 FLYWCH1Q4VC44 716 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 SLC9B1Q4ZJI4 515 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 TTMPQ5BVD1 217 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 MTERF4Q7Z6M4 381 aaKnown RBP16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 UBQLNLQ8IYU4 475 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 MEIOBQ8N635 442 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 C9orf106Q8NAJ2 232 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 ACBD4Q8NC06 268 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 OR5M1Q8NGP8 315 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 PHOSPHO1Q8TCT1 267 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 DYDC1Q8WWB3 177 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 MAELQ96JY0 434 aaKnown RBP16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 TEX37Q96LM6 180 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 TRIM8Q9BZR9 551 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 STOML1Q9UBI4 398 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 BTNL2Q9UIR0 455 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 GPR45Q9Y5Y3 372 aa16.59■□□□□ 0.25
SYNGR3-204ENST00000564642 DOCK7Q96N67 2140 aa16.58■□□□□ 0.25
SYNGR3-204ENST00000564642 A0A087WZY1 265 aa16.58■□□□□ 0.24
SYNGR3-204ENST00000564642 NPIPA5A0A0B4J1W7 369 aa16.58■□□□□ 0.24
SYNGR3-204ENST00000564642 NPIPA7E9PJI5 369 aa16.58■□□□□ 0.24
SYNGR3-204ENST00000564642 AK1P00568 194 aa16.58■□□□□ 0.24
SYNGR3-204ENST00000564642 NPIPA8P0DM63 369 aa16.58■□□□□ 0.24
SYNGR3-204ENST00000564642 TMIGD3P0DMS9 266 aaPredicted RBP16.58■□□□□ 0.24
SYNGR3-204ENST00000564642 IDO1P14902 403 aa16.58■□□□□ 0.24
SYNGR3-204ENST00000564642 SSTR2P30874 369 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms