RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ALPPP05187 535 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 IL12BP29460 328 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 RFX3P48380 749 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 TMED10P49755 219 aaKnown RBP11.88□□□□□ -0.51
SPG7-209ENST00000564047 CRYBA2P53672 197 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 ATP12AP54707 1039 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 EFR3AQ14156 821 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 TRIP10Q15642 601 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 GPR68Q15743 365 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 ZNF141Q15928 474 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 MEP1AQ16819 746 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 CYBRD1Q53TN4 286 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 BROXQ5VW32 411 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 OPN5Q6U736 354 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 LYPD8Q6UX82 237 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 EIF3MQ7L2H7 374 aaKnown RBP11.88□□□□□ -0.51
SPG7-209ENST00000564047 ZAR1Q86SH2 424 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 GALNT10Q86SR1 603 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 SPATA24Q86W54 205 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 ARMC8Q8IUR7 673 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 SPACA3Q8IXA5 215 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 PEX5LQ8IYB4 626 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 PRR22Q8IZ63 422 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 BRIX1Q8TDN6 353 aaKnown RBP11.88□□□□□ -0.51
SPG7-209ENST00000564047 TAMM41Q96BW9 452 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 EFHD2Q96C19 240 aaPredicted RBP11.88□□□□□ -0.51
SPG7-209ENST00000564047 ZNF354BQ96LW1 612 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 RASL10BQ96S79 203 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 ADOQ96SZ5 270 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 MYCBPQ99417 103 aaPredicted RBP11.88□□□□□ -0.51
SPG7-209ENST00000564047 CACYBPQ9HB71 228 aaKnown RBP11.88□□□□□ -0.51
SPG7-209ENST00000564047 RIMS3Q9UJD0 308 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 IFT52Q9Y366 437 aa11.88□□□□□ -0.51
SPG7-209ENST00000564047 NPIPB9F8W1W9 429 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 CDK2AP1O14519 115 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 HS6ST1O60243 411 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 UGT2B17O75795 530 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 GPIP06744 558 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 DBIP07108 87 aaKnown RBP11.87□□□□□ -0.51
SPG7-209ENST00000564047 THBS1P07996 1170 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 FBXO45P0C2W1 286 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 PABPC4LP0CB38 370 aaKnown RBP11.87□□□□□ -0.51
SPG7-209ENST00000564047 UMPSP11172 480 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 CYP4B1P13584 511 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 UQCRBP14927 111 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 RPS4Y1P22090 263 aaKnown RBP11.87□□□□□ -0.51
SPG7-209ENST00000564047 ITGA3P26006 1051 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 DCTP40126 519 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 SSR4P51571 173 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 UCNP55089 124 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 TMPRSS3P57727 454 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 SELENOWP63302 87 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 ACER2Q5QJU3 275 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 CCDC81Q6ZN84 652 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 NUP54Q7Z3B4 507 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 DND1Q8IYX4 353 aaKnown RBP11.87□□□□□ -0.51
SPG7-209ENST00000564047 GALNT16Q8N428 558 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 SIRT6Q8N6T7 355 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 OR52P1PQ8NH57 321 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 LZICQ8WZA0 190 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 ZG16BQ96DA0 208 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 QRSL1Q9H0R6 528 aaKnown RBP11.87□□□□□ -0.51
SPG7-209ENST00000564047 ING2Q9H160 280 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 UBQLN4Q9NRR5 601 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 SEC14L3Q9UDX4 400 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 TEKT2Q9UIF3 430 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 KCNE5Q9UJ90 142 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 CNOT11Q9UKZ1 510 aaKnown RBP11.87□□□□□ -0.51
SPG7-209ENST00000564047 ZNF232Q9UNY5 417 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 DTNAQ9Y4J8 743 aa11.87□□□□□ -0.51
SPG7-209ENST00000564047 VGLL3A8MV65 326 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 TMEM229AB2RXF0 380 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 H0YJX3 145 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 SUV39H1O43463 412 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 MAN1A2O60476 641 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 UGT2B11O75310 529 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 PRKD3O94806 890 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 UTS2O95399 124 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 ZNF682O95780 498 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 OPN1SWP03999 348 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 NGFRP08138 427 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 IL7RP16871 459 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 HOXB6P17509 224 aaKnown RBP11.86□□□□□ -0.51
SPG7-209ENST00000564047 CD247P20963 164 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 TBXA2RP21731 343 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 PEX2P28328 305 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 PRKAR1BP31321 381 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 KCNJ5P48544 419 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 HSPA13P48723 471 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 LARS2Q15031 903 aaKnown RBP11.86□□□□□ -0.51
SPG7-209ENST00000564047 NTRK2Q16620 822 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 ZSWIM7Q19AV6 140 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 DEFB109BQ30KR1 87 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 ZNF791Q3KP31 576 aaPredicted RBP11.86□□□□□ -0.51
SPG7-209ENST00000564047 LIN52Q52LA3 116 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 ZNF311Q5JNZ3 666 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 B3GNTL1Q67FW5 361 aaPredicted RBP11.86□□□□□ -0.51
SPG7-209ENST00000564047 FCRLBQ6BAA4 426 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 DHRS4L2Q6PKH6 230 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 GPALPP1Q8IXQ4 340 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms