RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 CPSF4O95639 269 aaKnown RBP27.83■■■□□ 2.05
CMTM4-204ENST00000563952 BMP5P22003 454 aa27.83■■■□□ 2.05
CMTM4-204ENST00000563952 CLDN18P56856 261 aa27.83■■■□□ 2.05
CMTM4-204ENST00000563952 SPANXN4Q5MJ08 99 aa27.83■■■□□ 2.05
CMTM4-204ENST00000563952 DCST2Q5T1A1 773 aa27.83■■■□□ 2.05
CMTM4-204ENST00000563952 ANXA8L1Q5VT79 327 aa27.83■■■□□ 2.05
CMTM4-204ENST00000563952 NXNQ6DKJ4 435 aa27.83■■■□□ 2.05
CMTM4-204ENST00000563952 SPATA19Q7Z5L4 167 aa27.83■■■□□ 2.05
CMTM4-204ENST00000563952 VPS37AQ8NEZ2 397 aa27.83■■■□□ 2.05
CMTM4-204ENST00000563952 OR5D16Q8NGK9 328 aa27.83■■■□□ 2.05
CMTM4-204ENST00000563952 ATP6V1G3Q96LB4 118 aa27.83■■■□□ 2.05
CMTM4-204ENST00000563952 OR7D2Q96RA2 312 aa27.83■■■□□ 2.05
CMTM4-204ENST00000563952 AIG1Q9NVV5 245 aa27.83■■■□□ 2.05
CMTM4-204ENST00000563952 IGLV3-32A0A0A0MS00 114 aa27.82■■■□□ 2.04
CMTM4-204ENST00000563952 MBD3L4A6NDZ8 208 aaPredicted RBP27.82■■■□□ 2.04
CMTM4-204ENST00000563952 MBD3L3A6NE82 208 aaPredicted RBP27.82■■■□□ 2.04
CMTM4-204ENST00000563952 MBD3L5A6NJ08 208 aaPredicted RBP27.82■■■□□ 2.04
CMTM4-204ENST00000563952 DVL2O14641 736 aa27.82■■■□□ 2.04
CMTM4-204ENST00000563952 ZNF708P17019 499 aa27.82■■■□□ 2.04
CMTM4-204ENST00000563952 POU3F2P20265 443 aaPredicted RBP27.82■■■□□ 2.04
CMTM4-204ENST00000563952 UFM1P61960 85 aa27.82■■■□□ 2.04
CMTM4-204ENST00000563952 PHC1P78364 1004 aa27.82■■■□□ 2.04
CMTM4-204ENST00000563952 FAM174BQ3ZCQ3 159 aa27.82■■■□□ 2.04
CMTM4-204ENST00000563952 PLXDC2Q6UX71 529 aa27.82■■■□□ 2.04
CMTM4-204ENST00000563952 C6orf120Q7Z4R8 191 aa27.82■■■□□ 2.04
CMTM4-204ENST00000563952 UBQLNLQ8IYU4 475 aa27.82■■■□□ 2.04
CMTM4-204ENST00000563952 ACBD4Q8NC06 268 aa27.82■■■□□ 2.04
CMTM4-204ENST00000563952 MBD3L2Q8NHZ7 208 aaPredicted RBP27.82■■■□□ 2.04
CMTM4-204ENST00000563952 ZNF75CPQ92670 426 aaPredicted RBP27.82■■■□□ 2.04
CMTM4-204ENST00000563952 PRSS51A0A1B0GVH4 220 aa27.81■■■□□ 2.04
CMTM4-204ENST00000563952 CLCA1A8K7I4 914 aa27.81■■■□□ 2.04
CMTM4-204ENST00000563952 E9PBE3 544 aa27.81■■■□□ 2.04
CMTM4-204ENST00000563952 MATN1P21941 496 aa27.81■■■□□ 2.04
CMTM4-204ENST00000563952 S100A3P33764 101 aa27.81■■■□□ 2.04
CMTM4-204ENST00000563952 DGKQP52824 942 aa27.81■■■□□ 2.04
CMTM4-204ENST00000563952 DPY19L1Q2PZI1 675 aa27.81■■■□□ 2.04
CMTM4-204ENST00000563952 ARSKQ6UWY0 536 aa27.81■■■□□ 2.04
CMTM4-204ENST00000563952 ZNF295-AS1Q8N0V1 137 aa27.81■■■□□ 2.04
CMTM4-204ENST00000563952 C9orf106Q8NAJ2 232 aa27.81■■■□□ 2.04
CMTM4-204ENST00000563952 SH3YL1Q96HL8 342 aaPredicted RBP27.81■■■□□ 2.04
CMTM4-204ENST00000563952 SLC35G5Q96KT7 338 aa27.81■■■□□ 2.04
CMTM4-204ENST00000563952 TEX37Q96LM6 180 aa27.81■■■□□ 2.04
CMTM4-204ENST00000563952 HHATLQ9HCP6 504 aa27.81■■■□□ 2.04
CMTM4-204ENST00000563952 VDAC3Q9Y277 283 aa27.81■■■□□ 2.04
CMTM4-204ENST00000563952 NPIPA5A0A0B4J1W7 369 aa27.8■■■□□ 2.04
CMTM4-204ENST00000563952 C9JVG2 144 aa27.8■■■□□ 2.04
CMTM4-204ENST00000563952 NPIPA7E9PJI5 369 aa27.8■■■□□ 2.04
CMTM4-204ENST00000563952 KLF11O14901 512 aa27.8■■■□□ 2.04
CMTM4-204ENST00000563952 SCN2BO60939 215 aa27.8■■■□□ 2.04
CMTM4-204ENST00000563952 SOX30O94993 753 aa27.8■■■□□ 2.04
CMTM4-204ENST00000563952 NPIPA8P0DM63 369 aa27.8■■■□□ 2.04
CMTM4-204ENST00000563952 IGFBP2P18065 325 aa27.8■■■□□ 2.04
CMTM4-204ENST00000563952 ZNF136P52737 540 aa27.8■■■□□ 2.04
CMTM4-204ENST00000563952 TTMPQ5BVD1 217 aa27.8■■■□□ 2.04
CMTM4-204ENST00000563952 RELL2Q8NC24 303 aaPredicted RBP27.8■■■□□ 2.04
CMTM4-204ENST00000563952 PIGQQ9BRB3 760 aa27.8■■■□□ 2.04
CMTM4-204ENST00000563952 SERHL2Q9H4I8 314 aa27.8■■■□□ 2.04
CMTM4-204ENST00000563952 ARGLU1Q9NWB6 273 aaPredicted RBP27.8■■■□□ 2.04
CMTM4-204ENST00000563952 ZNF337Q9Y3M9 751 aa27.8■■■□□ 2.04
CMTM4-204ENST00000563952 INTS1Q8N201 2190 aaKnown RBP27.8■■■□□ 2.04
CMTM4-204ENST00000563952 TEX15Q9BXT5 2789 aa27.8■■■□□ 2.04
CMTM4-204ENST00000563952 OR2M5A3KFT3 312 aa27.79■■■□□ 2.04
CMTM4-204ENST00000563952 SHISA8B8ZZ34 492 aa27.79■■■□□ 2.04
CMTM4-204ENST00000563952 H3BML4 177 aa27.79■■■□□ 2.04
CMTM4-204ENST00000563952 PEPDP12955 493 aa27.79■■■□□ 2.04
CMTM4-204ENST00000563952 RNF144AP50876 292 aaPredicted RBP27.79■■■□□ 2.04
CMTM4-204ENST00000563952 AGFG1P52594 562 aaKnown RBP27.79■■■□□ 2.04
CMTM4-204ENST00000563952 CASP9P55211 416 aa27.79■■■□□ 2.04
CMTM4-204ENST00000563952 BCL2A1Q16548 175 aa27.79■■■□□ 2.04
CMTM4-204ENST00000563952 HDXQ7Z353 690 aa27.79■■■□□ 2.04
CMTM4-204ENST00000563952 PIWIL2Q8TC59 973 aaKnown RBP27.79■■■□□ 2.04
CMTM4-204ENST00000563952 TREX2Q9BQ50 279 aaPredicted RBP27.79■■■□□ 2.04
CMTM4-204ENST00000563952 ZNF629Q9UEG4 869 aaPredicted RBP27.79■■■□□ 2.04
CMTM4-204ENST00000563952 DOCK7Q96N67 2140 aa27.79■■■□□ 2.04
CMTM4-204ENST00000563952 CD226Q15762 336 aa27.78■■■□□ 2.04
CMTM4-204ENST00000563952 GLYR1Q49A26 553 aaPredicted RBP27.78■■■□□ 2.04
CMTM4-204ENST00000563952 FLYWCH1Q4VC44 716 aa27.78■■■□□ 2.04
CMTM4-204ENST00000563952 SLC9B1Q4ZJI4 515 aa27.78■■■□□ 2.04
CMTM4-204ENST00000563952 CHMP1BQ7LBR1 199 aa27.78■■■□□ 2.04
CMTM4-204ENST00000563952 MAVSQ7Z434 540 aa27.78■■■□□ 2.04
CMTM4-204ENST00000563952 MEIOBQ8N635 442 aa27.78■■■□□ 2.04
CMTM4-204ENST00000563952 GOLGA6L1Q8N7Z2 621 aa27.78■■■□□ 2.04
CMTM4-204ENST00000563952 ZNF527Q8NB42 609 aa27.78■■■□□ 2.04
CMTM4-204ENST00000563952 SMPDL3BQ92485 455 aa27.78■■■□□ 2.04
CMTM4-204ENST00000563952 MARK4Q96L34 752 aa27.78■■■□□ 2.04
CMTM4-204ENST00000563952 HOXD1Q9GZZ0 328 aa27.78■■■□□ 2.04
CMTM4-204ENST00000563952 GPR45Q9Y5Y3 372 aa27.78■■■□□ 2.04
CMTM4-204ENST00000563952 A0A1W2PQD3 144 aa27.77■■■□□ 2.04
CMTM4-204ENST00000563952 SEC14L5O43304 696 aa27.77■■■□□ 2.04
CMTM4-204ENST00000563952 TMIGD3P0DMS9 266 aaPredicted RBP27.77■■■□□ 2.04
CMTM4-204ENST00000563952 UQCRC2P22695 453 aa27.77■■■□□ 2.04
CMTM4-204ENST00000563952 CTSSP25774 331 aa27.77■■■□□ 2.04
CMTM4-204ENST00000563952 POMZP3Q6PJE2 187 aa27.77■■■□□ 2.04
CMTM4-204ENST00000563952 ADGRE4PQ86SQ3 457 aa27.77■■■□□ 2.04
CMTM4-204ENST00000563952 GRAMD2AQ8IUY3 354 aa27.77■■■□□ 2.04
CMTM4-204ENST00000563952 MISPQ8IVT2 679 aa27.77■■■□□ 2.04
CMTM4-204ENST00000563952 DMRTC2Q8IXT2 367 aaPredicted RBP27.77■■■□□ 2.04
CMTM4-204ENST00000563952 GOT1L1Q8NHS2 421 aaPredicted RBP27.77■■■□□ 2.04
CMTM4-204ENST00000563952 PHOSPHO1Q8TCT1 267 aa27.77■■■□□ 2.04
CMTM4-204ENST00000563952 WNT2BQ93097 391 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms