RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 TNFSF11O14788 317 aa11.63□□□□□ -0.55
SF3B3-202ENST00000562722 SS18L1O75177 396 aaPredicted RBP11.63□□□□□ -0.55
SF3B3-202ENST00000562722 SEC22BO75396 215 aa11.63□□□□□ -0.55
SF3B3-202ENST00000562722 RSL1D1O76021 490 aaKnown RBP11.63□□□□□ -0.55
SF3B3-202ENST00000562722 ATP5J2P56134 94 aa11.63□□□□□ -0.55
SF3B3-202ENST00000562722 SLC29A2Q14542 456 aa11.63□□□□□ -0.55
SF3B3-202ENST00000562722 TMEM44Q2T9K0 475 aa11.63□□□□□ -0.55
SF3B3-202ENST00000562722 GLE1Q53GS7 698 aaKnown RBP11.63□□□□□ -0.55
SF3B3-202ENST00000562722 PDSS1Q5T2R2 415 aa11.63□□□□□ -0.55
SF3B3-202ENST00000562722 FIGNL1Q6PIW4 674 aa11.63□□□□□ -0.55
SF3B3-202ENST00000562722 STAC2Q6ZMT1 411 aa11.63□□□□□ -0.55
SF3B3-202ENST00000562722 TRMT10CQ7L0Y3 403 aaKnown RBP11.63□□□□□ -0.55
SF3B3-202ENST00000562722 OR2V1Q8NHB1 315 aa11.63□□□□□ -0.55
SF3B3-202ENST00000562722 ZFP28Q8NHY6 868 aa11.63□□□□□ -0.55
SF3B3-202ENST00000562722 ACMSDQ8TDX5 336 aa11.63□□□□□ -0.55
SF3B3-202ENST00000562722 ZBTB8AQ96BR9 441 aa11.63□□□□□ -0.55
SF3B3-202ENST00000562722 SH3YL1Q96HL8 342 aaPredicted RBP11.63□□□□□ -0.55
SF3B3-202ENST00000562722 RNF145Q96MT1 663 aa11.63□□□□□ -0.55
SF3B3-202ENST00000562722 TACO1Q9BSH4 297 aaKnown RBP11.63□□□□□ -0.55
SF3B3-202ENST00000562722 PSMC3IPQ9P2W1 217 aaPredicted RBP11.63□□□□□ -0.55
SF3B3-202ENST00000562722 DCDC2Q9UHG0 476 aa11.63□□□□□ -0.55
SF3B3-202ENST00000562722 NSD1Q96L73 2696 aaPredicted RBP11.63□□□□□ -0.55
SF3B3-202ENST00000562722 A0A1W2PRB8 838 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 ALG1L2C9J202 215 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 SCDO00767 359 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 KLF4O43474 513 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 AKAP10O43572 662 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 OXSR1O95747 527 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-202ENST00000562722 PLAUP00749 431 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 TUBBP07437 444 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 MANFP55145 182 aaKnown RBP11.62□□□□□ -0.55
SF3B3-202ENST00000562722 SLC18A2Q05940 514 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.62□□□□□ -0.55
SF3B3-202ENST00000562722 CTU2Q2VPK5 515 aaKnown RBP11.62□□□□□ -0.55
SF3B3-202ENST00000562722 HBMQ6B0K9 141 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 ZYG11AQ6WRX3 759 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 BEND4Q6ZU67 534 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 SH2D5Q6ZV89 423 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 TRIM46Q7Z4K8 759 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 GTPBP8Q8N3Z3 284 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-202ENST00000562722 CDRT4Q8N9R6 151 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 CCDC63Q8NA47 563 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 NUP43Q8NFH3 380 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 CEP70Q8NHQ1 597 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.62□□□□□ -0.55
SF3B3-202ENST00000562722 JADE3Q92613 823 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 AKAP1Q92667 903 aaKnown RBP eCLIP11.62□□□□□ -0.55
SF3B3-202ENST00000562722 CIDECQ96AQ7 238 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-202ENST00000562722 PPCDCQ96CD2 204 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 CHMP6Q96FZ7 201 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 REXO5Q96IC2 774 aaKnown RBP11.62□□□□□ -0.55
SF3B3-202ENST00000562722 EGLN2Q96KS0 407 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 MS4A4EQ96PG1 132 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 MDFIQ99750 246 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 GLRX2Q9NS18 164 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 MED17Q9NVC6 651 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 ARID1AO14497 2285 aa11.62□□□□□ -0.55
SF3B3-202ENST00000562722 G3V2L1 256 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 H3BQF6 201 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 HS3ST1O14792 307 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 CLOCKO15516 846 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 RIPK2O43353 540 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 RGS14O43566 566 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 NKX2-2O95096 273 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 NID1P14543 1247 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 SFTPDP35247 375 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 NAA20P61599 178 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 RAC1P63000 192 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 CPTPQ5TA50 214 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 GTF2IRD2BQ6EKJ0 949 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 FRMD7Q6ZUT3 714 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 ESPNLQ6ZVH7 1005 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 GTF2IRD2Q86UP8 949 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 ZNF611Q8N823 705 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 COX18Q8N8Q8 333 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 OR4C3Q8NH37 302 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 ZBED6CLQ96FA7 236 aaPredicted RBP11.61□□□□□ -0.55
SF3B3-202ENST00000562722 OTUB1Q96FW1 271 aaPredicted RBP11.61□□□□□ -0.55
SF3B3-202ENST00000562722 LRTM1Q9HBL6 345 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 SH3BP4Q9P0V3 963 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 EMCNQ9ULC0 261 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 LAMP3Q9UQV4 416 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 GPR52Q9Y2T5 361 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 FIS1Q9Y3D6 152 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 PTGDR2Q9Y5Y4 395 aa11.61□□□□□ -0.55
SF3B3-202ENST00000562722 A0A0J9YW62 118 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 SLC28A1O00337 649 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 ADAMDEC1O15204 470 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 GLRA3O75311 464 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 KCNK2O95069 426 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 NGFRP08138 427 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 IFI6P09912 130 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 ALOX5P09917 674 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 PABPC4LP0CB38 370 aaKnown RBP11.6□□□□□ -0.55
SF3B3-202ENST00000562722 UROSP10746 265 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 ACP2P11117 423 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 IL11P20809 199 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 IL32P24001 234 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 AGTR1P30556 359 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 CARD18P57730 90 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms