RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 NPIPA7E9PJI5 369 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 POC1B-GALNT4F8VUJ3 575 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 STX16-NPEPL1H3BU86 382 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 STX16O14662 325 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 OIP5O43482 229 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 PLOD3O60568 738 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 GCM2O75603 506 aaPredicted RBP10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 BCAS2O75934 225 aaPredicted RBP10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 SUPT7LO94864 414 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 IL33O95760 270 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 ANXA4P09525 319 aaPredicted RBP10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 NPIPA8P0DM63 369 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 PPP3CBP16298 524 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 HMOX2P30519 316 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 TIA1P31483 386 aaKnown RBP eCLIP10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 HSD17B3P37058 310 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 GUCY2DQ02846 1103 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 CLCQ05315 142 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 ACSM2AQ08AH3 577 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 NAB1Q13506 487 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 GANABQ14697 944 aaKnown RBP10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 TMEM44Q2T9K0 475 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 NDUFAF6Q330K2 333 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 UNC50Q53HI1 259 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 CCNJQ5T5M9 372 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 ACSM2BQ68CK6 577 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 BEND4Q6ZU67 534 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 CYS1Q717R9 158 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 C17orf53Q8N3J3 647 aaPredicted RBP10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 ZNF525Q8N782 197 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 GBP7Q8N8V2 638 aaPredicted RBP10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 BANPQ8N9N5 519 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 OR4C3Q8NH37 302 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 OR2V1Q8NHB1 315 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 POC1BQ8TC44 478 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 GPR151Q8TDV0 419 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 OSTF1Q92882 214 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 CIDECQ96AQ7 238 aaPredicted RBP10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 TMEM237Q96Q45 408 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 KCNK17Q96T54 332 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 CHODLQ9H9P2 273 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 BRF2Q9HAW0 419 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 SDHAF3Q9NRP4 125 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 PRSS50Q9UI38 385 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 PYCARDQ9ULZ3 195 aa10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 UTP11Q9Y3A2 253 aaKnown RBP10.39□□□□□ -0.75
NSMCE1-202ENST00000561960 A0A1W2PRB8 838 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 TRIM49D1C9J1S8 452 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 COQ9O75208 318 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 TUBBP07437 444 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 RBP1P09455 135 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 MPIP34949 423 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 PRIM2P49643 509 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 CLK3P49761 638 aaKnown RBP10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 NUDT6P53370 316 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 CDH11P55287 796 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 FOXA1P55317 472 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 TRA2BP62995 288 aaKnown RBP10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 IRX1P78414 480 aaPredicted RBP10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 MRPS22P82650 360 aaKnown RBP10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 SLC18A2Q05940 514 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 FOXF1Q12946 379 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 FGFBP1Q14512 234 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 SEZ6L2Q6UXD5 910 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 TFAP2EQ6VUC0 442 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 GPRIN3Q6ZVF9 776 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 STK32CQ86UX6 486 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 METTL6Q8TCB7 284 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 DTNBP1Q96EV8 351 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 C19orf24Q9BVV8 132 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 SHCBP1LQ9BZQ2 653 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 TRIM2Q9C040 744 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 ALG2Q9H553 416 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 Q9N2J8 555 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 MED17Q9NVC6 651 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 GIN1Q9NXP7 522 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 NPAP1Q9NZP6 1156 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 ABCG2Q9UNQ0 655 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 B3GALT5Q9Y2C3 310 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 PTGDR2Q9Y5Y4 395 aa10.38□□□□□ -0.75
NSMCE1-202ENST00000561960 MYO1GB0I1T2 1018 aa10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 TLX2O43763 284 aaPredicted RBP10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 OXSR1O95747 527 aaPredicted RBP10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 IGHV3-9P01782 118 aa10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 PCYT1AP49585 367 aa10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 ZNF41P51814 821 aaPredicted RBP10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 C17orf67Q0P5P2 114 aa10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 HEPACAMQ14CZ8 416 aa10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 ZNHIT3Q15649 155 aaPredicted RBP10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 CD226Q15762 336 aa10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 ZNF239Q16600 458 aaKnown RBP10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 TMEM249Q2WGJ8 235 aa10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 PLPPR5Q32ZL2 321 aa10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 CYP27C1Q4G0S4 372 aa10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 BHLHA15Q7RTS1 189 aaPredicted RBP10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 WDR75Q8IWA0 830 aaKnown RBP10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 LILRA2Q8N149 483 aa10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 GABRG1Q8N1C3 465 aa10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 CLHC1Q8NHS4 586 aa10.37□□□□□ -0.75
NSMCE1-202ENST00000561960 RFWD2Q8NHY2 731 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms