RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 IL6P05231 212 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 GP1BBP13224 206 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 DCTP40126 519 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 CRATP43155 626 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 KHKP50053 298 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 HPCAP84074 193 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 GUCY1A3Q02108 690 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 NDUFAF6Q330K2 333 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 AGKQ53H12 422 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 DCST1Q5T197 706 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 C1orf185Q5T7R7 199 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 AAGABQ6PD74 315 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 SLC2A7Q6PXP3 512 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 ENPP6Q6UWR7 440 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 PLXDC2Q6UX71 529 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 APOOLQ6UXV4 268 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 CHMP1BQ7LBR1 199 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 ZNF808Q8N4W9 903 aaPredicted RBP9.2□□□□□ -0.94
HERC1-212ENST00000561348 ZNF527Q8NB42 609 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 GLB1L3Q8NCI6 653 aaPredicted RBP9.2□□□□□ -0.94
HERC1-212ENST00000561348 OR2M3Q8NG83 312 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 ITLN2Q8WWU7 325 aaPredicted RBP9.2□□□□□ -0.94
HERC1-212ENST00000561348 DTNBP1Q96EV8 351 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 ITCHQ96J02 903 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 MAELQ96JY0 434 aaKnown RBP9.2□□□□□ -0.94
HERC1-212ENST00000561348 UGT2B28Q9BY64 529 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 UBQLN3Q9H347 655 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 SERHL2Q9H4I8 314 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 DUSP22Q9NRW4 184 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 ZIM2Q9NZV7 527 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 NTMQ9P121 344 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 BTNL2Q9UIR0 455 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 ABCG2Q9UNQ0 655 aa9.2□□□□□ -0.94
HERC1-212ENST00000561348 FLNBO75369 2602 aaKnown RBP9.2□□□□□ -0.94
HERC1-212ENST00000561348 SPTAN1Q13813 2472 aaKnown RBP9.19□□□□□ -0.94
HERC1-212ENST00000561348 A0A1B0GVC2 190 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 FAM234BA2RU67 622 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 H3BNH8 94 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 ADAM10O14672 748 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 EDF1O60869 148 aaKnown RBP9.19□□□□□ -0.94
HERC1-212ENST00000561348 SCN2BO60939 215 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 WDR1O75083 606 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 IFI6P09912 130 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 TROVE2P10155 538 aaKnown RBP eCLIP9.19□□□□□ -0.94
HERC1-212ENST00000561348 GABRA1P14867 456 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 POU3F2P20265 443 aaPredicted RBP9.19□□□□□ -0.94
HERC1-212ENST00000561348 TBXA2RP21731 343 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 HTR1EP28566 365 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 SRD5A2P31213 254 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 ZNF41P51814 821 aaPredicted RBP9.19□□□□□ -0.94
HERC1-212ENST00000561348 GAS1P54826 345 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 DSCR4P56555 118 aaPredicted RBP9.19□□□□□ -0.94
HERC1-212ENST00000561348 CRYZQ08257 329 aaKnown RBP9.19□□□□□ -0.94
HERC1-212ENST00000561348 RCAN2Q14206 197 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 GTDC1Q4AE62 458 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 ZNF787Q6DD87 383 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 TMEM81Q6P7N7 255 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 XKRXQ6PP77 449 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 ARSKQ6UWY0 536 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 ULK2Q8IYT8 1036 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 MARVELD2Q8N4S9 558 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 ATP6V1C2Q8NEY4 427 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 PSMA8Q8TAA3 256 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 ARSGQ96EG1 525 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 CCDC115Q96NT0 180 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 TTYH2Q9BSA4 534 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 CCDC28BQ9BUN5 200 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 UCK2Q9BZX2 261 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 TMEM185BQ9H7F4 350 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 SDR39U1Q9NRG7 319 aaPredicted RBP9.19□□□□□ -0.94
HERC1-212ENST00000561348 FGFR1OP2Q9NVK5 253 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 RNF6Q9Y252 685 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 CARD8Q9Y2G2 431 aa9.19□□□□□ -0.94
HERC1-212ENST00000561348 NKX2-6A6NCS4 301 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 WIPF3A6NGB9 483 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 KDM4EB2RXH2 506 aaPredicted RBP9.18□□□□□ -0.94
HERC1-212ENST00000561348 ALG1L2C9J202 215 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 ZIC3O60481 467 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 FCMRO60667 390 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 STX11O75558 287 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 CLDN14O95500 239 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 KRT75O95678 551 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 ACTL6AO96019 429 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 GLI4P10075 376 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 NR2F1P10589 423 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 GRNP28799 593 aaKnown RBP9.18□□□□□ -0.94
HERC1-212ENST00000561348 MAP3K8P41279 467 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 ANXA11P50995 505 aaKnown RBP9.18□□□□□ -0.94
HERC1-212ENST00000561348 AGFG1P52594 562 aaKnown RBP9.18□□□□□ -0.94
HERC1-212ENST00000561348 CDSNQ15517 529 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 CD226Q15762 336 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 SGCBQ16585 318 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.18□□□□□ -0.94
HERC1-212ENST00000561348 COX20Q5RI15 118 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.18□□□□□ -0.94
HERC1-212ENST00000561348 PDZK1Q5T2W1 519 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 SAXO2Q658L1 398 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 SP5Q6BEB4 398 aaPredicted RBP9.18□□□□□ -0.94
HERC1-212ENST00000561348 VASNQ6EMK4 673 aa9.18□□□□□ -0.94
HERC1-212ENST00000561348 POMZP3Q6PJE2 187 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms