RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 PAIP1Q9H074 479 aaKnown RBP9.8□□□□□ -0.84
TPM1-229ENST00000561242 GALNT9Q9HCQ5 603 aa9.8□□□□□ -0.84
TPM1-229ENST00000561242 TIGARQ9NQ88 270 aa9.8□□□□□ -0.84
TPM1-229ENST00000561242 SERHLQ9NQF3 203 aa9.8□□□□□ -0.84
TPM1-229ENST00000561242 TAGLN3Q9UI15 199 aa9.8□□□□□ -0.84
TPM1-229ENST00000561242 OSGIN2Q9Y236 505 aa9.8□□□□□ -0.84
TPM1-229ENST00000561242 TPRP12270 2363 aaKnown RBP9.79□□□□□ -0.84
TPM1-229ENST00000561242 A0A1W2PQD3 144 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 OR14I1A6ND48 311 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 SERINC4A6NH21 518 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 NPIPA2E9PIF3 369 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 NPIPA3F8WFD2 350 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 SUSD5O60279 629 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 ACTL6AO96019 429 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 HOXD4P09016 255 aaPredicted RBP9.79□□□□□ -0.84
TPM1-229ENST00000561242 LINGO3P0C6S8 592 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 GP1BBP13224 206 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 GABRA1P14867 456 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 SRD5A2P31213 254 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 RASSF2P50749 326 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 P2RX1P51575 399 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 SMSP52788 366 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 SUMO3P55854 103 aaPredicted RBP9.79□□□□□ -0.84
TPM1-229ENST00000561242 CDK6Q00534 326 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 SCARB2Q14108 478 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 IGFBP7Q16270 282 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 RUNDC3AQ59EK9 446 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 ZNF311Q5JNZ3 666 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 PAGE3Q5JUK9 113 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 LRIF1Q5T3J3 769 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 PRAMEF8Q5VWM4 474 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 PRAMEF7Q5VXH5 474 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 ZNF585AQ6P3V2 769 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 LYPD8Q6UX82 237 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 P4HA3Q7Z4N8 544 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 PATL1Q86TB9 770 aaKnown RBP9.79□□□□□ -0.84
TPM1-229ENST00000561242 FUNDC1Q8IVP5 155 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 CMIPQ8IY22 773 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 DPP10Q8N608 796 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 POU5F2Q8N7G0 328 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 Q8NA96 180 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 HIPK4Q8NE63 616 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 OR8J3Q8NGG0 315 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 OR10Q1Q8NGQ4 319 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 OR4C3Q8NH37 302 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 OR52P1PQ8NH57 321 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 FAM110BQ8TC76 370 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 ABTB1Q969K4 478 aaPredicted RBP9.79□□□□□ -0.84
TPM1-229ENST00000561242 LRRC46Q96FV0 321 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 ANKRD27Q96NW4 1050 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 EVA1AQ9H8M9 152 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 ACKR4Q9NPB9 350 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 COQ3Q9NZJ6 369 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 MED11Q9P086 117 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 SH3BGRL2Q9UJC5 107 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 RPH3AQ9Y2J0 694 aaPredicted RBP9.79□□□□□ -0.84
TPM1-229ENST00000561242 C15orf41Q9Y2V0 281 aa9.79□□□□□ -0.84
TPM1-229ENST00000561242 A0A1B0GTH9 108 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 HMGN4O00479 90 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 DNAJA2O60884 412 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 TRIM3O75382 744 aaPredicted RBP9.78□□□□□ -0.84
TPM1-229ENST00000561242 AGFG2O95081 481 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 WISP1O95388 367 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 GUSBP08236 651 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 UBTFL6P0CB48 400 aaPredicted RBP9.78□□□□□ -0.84
TPM1-229ENST00000561242 PEPDP12955 493 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 POU3F2P20265 443 aaPredicted RBP9.78□□□□□ -0.84
TPM1-229ENST00000561242 TCEA1P23193 301 aaKnown RBP9.78□□□□□ -0.84
TPM1-229ENST00000561242 PTPN6P29350 595 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 PTGER4P35408 488 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 HTR3AP46098 478 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 KCNJ10P78508 379 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 GLYR1Q49A26 553 aaPredicted RBP9.78□□□□□ -0.84
TPM1-229ENST00000561242 PDZK1Q5T2W1 519 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 BICRALQ6AI39 1079 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 CGB2Q6NT52 195 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 PIGWQ7Z7B1 504 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 YRDCQ86U90 279 aaKnown RBP9.78□□□□□ -0.84
TPM1-229ENST00000561242 SPPL2CQ8IUH8 684 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 MCEMP1Q8IX19 187 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 OR10A6Q8NH74 314 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 NFKBIDQ8NI38 313 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 PROX1Q92786 737 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 ZBTB8AQ96BR9 441 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 RCN3Q96D15 328 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 AURKBQ96GD4 344 aaPredicted RBP9.78□□□□□ -0.84
TPM1-229ENST00000561242 NSL1Q96IY1 281 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 PIF1Q9H611 641 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 A4GALTQ9NPC4 353 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 PRDM4Q9UKN5 801 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 CAMK2AQ9UQM7 478 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 CARD8Q9Y2G2 431 aa9.78□□□□□ -0.84
TPM1-229ENST00000561242 DCHS1Q96JQ0 3298 aa9.77□□□□□ -0.85
TPM1-229ENST00000561242 H0Y3Z8 333 aa9.77□□□□□ -0.85
TPM1-229ENST00000561242 CCL21O00585 134 aa9.77□□□□□ -0.85
TPM1-229ENST00000561242 AQP7O14520 342 aa9.77□□□□□ -0.85
TPM1-229ENST00000561242 FADS1O60427 444 aa9.77□□□□□ -0.85
TPM1-229ENST00000561242 ZNF354AO60765 605 aaPredicted RBP9.77□□□□□ -0.85
TPM1-229ENST00000561242 SLC19A2O60779 497 aa9.77□□□□□ -0.85
TPM1-229ENST00000561242 SYNGR4O95473 234 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms