RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 NFYCQ13952 458 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 MAD2L1BPQ15013 274 aaPredicted RBP6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 TEPPQ6URK8 271 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 RASSF6Q6ZTQ3 369 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 CDKL3Q8IVW4 592 aaPredicted RBP6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 MS4A15Q8N5U1 240 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 JOSD2Q8TAC2 188 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 ESAMQ96AP7 390 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 CELF6Q96J87 481 aaKnown RBP6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 C10orf90Q96M02 699 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 RNF157Q96PX1 679 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 PANX1Q96RD7 426 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 CYP2S1Q96SQ9 504 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 RAD9AQ99638 391 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 MARVELD1Q9BSK0 173 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 TNFRSF12AQ9NP84 129 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 SLC52A3Q9NQ40 469 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 PURGQ9UJV8 347 aaKnown RBP6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 RUVBL2Q9Y230 463 aaKnown RBP6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 A0A087WZY1 265 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 A0A0G2JLL6 359 aaPredicted RBP6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 WRBO00258 174 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 GNGT2O14610 69 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 GPX5O75715 221 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 B4GALT1P15291 398 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 PRKACGP22612 351 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 PSMB4P28070 264 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 DLSTP36957 453 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 DCTP40126 519 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 OR4D2P58180 307 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 MC2RQ01718 297 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 SRSF5Q13243 272 aaKnown RBP6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 CDKL4Q5MAI5 379 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 GCNT6Q5T4J0 391 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 LCN1P1Q5VSP4 162 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 SEZ6L2Q6UXD5 910 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 CYHR1Q6ZMK1 362 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 FAM92BQ6ZTR7 304 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 CHMP1BQ7LBR1 199 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 PRRT2Q7Z6L0 340 aaPredicted RBP6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 LUZP2Q86TE4 346 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 LAX1Q8IWV1 398 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 MCEMP1Q8IX19 187 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 CPXM2Q8N436 756 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 C17orf47Q8NEP4 570 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 OR8D4Q8NGM9 314 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 SENP8Q96LD8 212 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 PCYT2Q99447 389 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 MRPL57Q9BQC6 102 aaKnown RBP6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 OR51M1Q9H341 326 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 GPR35Q9HC97 309 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 GALNT9Q9HCQ5 603 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 MKKSQ9NPJ1 570 aaPredicted RBP6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 RBFOX1Q9NWB1 397 aaKnown RBP6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 JKAMPQ9P055 326 aa6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 NDRG4Q9ULP0 352 aaKnown RBP6.29□□□□□ -1.4
TSPAN3-209ENST00000560715 IGKV6D-21A0A0A0MT36 114 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 EFCAB7A8K855 629 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 CDRT15L2A8MXV6 281 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 DDNO94850 711 aaPredicted RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 KLHL18O94889 574 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 LALBAP00709 142 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 CFDP00746 253 aaPredicted RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 S100PP25815 95 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 GABRA5P31644 462 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 SOAT1P35610 550 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 KIR3DL1P43629 444 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 YWHAEP62258 255 aaKnown RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 PTPRRQ15256 657 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 TIMM50Q3ZCQ8 353 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 PRAMEF7Q5VXH5 474 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ATRAIDQ6UW56 229 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 FAM131AQ6UXB0 335 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 SLC26A9Q7LBE3 791 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 GPR142Q7Z601 462 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 RTN4RL2Q86UN3 420 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 HIPK1Q86Z02 1210 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 UBE2J2Q8N2K1 259 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 STPG2Q8N412 459 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 BHLHE23Q8NDY6 225 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ACVR1CQ8NER5 493 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 OR11H4Q8NGC9 324 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ZNF675Q8TD23 568 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 UPRTQ96BW1 309 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 TMEM176AQ96HP8 235 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 TMEM68Q96MH6 324 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ZNF285Q96NJ3 590 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 OR5M11Q96RB7 305 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 DPH7Q9BTV6 452 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 XYLT2Q9H1B5 865 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 POMKQ9H5K3 350 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ZNF302Q9NR11 478 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ZNF275Q9NSD4 429 aaPredicted RBP6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 EPHA6Q9UF33 1036 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 PLEKHA6Q9Y2H5 1048 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 RNF215Q9Y6U7 377 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 PTPRJQ12913 1337 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 TRAV19A0A0A6YYK7 116 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 ARGFXA6NJG6 315 aa6.28□□□□□ -1.4
TSPAN3-209ENST00000560715 K7EQM0 130 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms