RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 ADAM5Q6NVV9 412 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 FIGNL1Q6PIW4 674 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 SZRD1Q7Z422 152 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 GTF2IRD2Q86UP8 949 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 GGNQ86UU5 652 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 MNS1Q8NEH6 495 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 KBTBD8Q8NFY9 601 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 OR2W6PQ8NHA6 318 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 FBXO25Q8TCJ0 367 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 C16orf78Q8WTQ4 265 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 TMEM204Q9BSN7 226 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 BEX2Q9BXY8 128 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 RAB17Q9H0T7 212 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 C3orf14Q9HBI5 128 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 BARX1Q9HBU1 254 aaPredicted RBP9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 EQTNQ9NQ60 294 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 FBXO34Q9NWN3 711 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 GRHL1Q9NZI5 618 aa9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 DMGDHQ9UI17 866 aaKnown RBP9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 GDF2Q9UK05 429 aaPredicted RBP9.37□□□□□ -0.91
CDC42BPB-207ENST00000560492 MANBAO00462 879 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 PPP6CO00743 305 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 PLOD3O60568 738 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 SUPT7LO94864 414 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 KCNH1O95259 989 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 IGHV4-39P01824 125 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 INHBAP08476 426 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 RPS17P08708 135 aaKnown RBP9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 FAM157CP0CG43 387 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 HPGDP15428 266 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 CHN1P15882 459 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 PSMB1P20618 241 aaKnown RBP9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 PTNP21246 168 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 AGTR1P30556 359 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 GABRA3P34903 492 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 PHBP35232 272 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 SFTPDP35247 375 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 PSG6Q00889 435 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 CKAP4Q07065 602 aaKnown RBP9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 C2orf80Q0P641 193 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 CSTF3Q12996 717 aaKnown RBP9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 WHAMMP3Q1A5X7 153 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 GRAMD1BQ3KR37 738 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 ZNF672Q499Z4 452 aaPredicted RBP9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 SPIN4Q56A73 249 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 NCMAPQ5T1S8 102 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 CLEC2AQ6UVW9 174 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 GALNT10Q86SR1 603 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 MMGT1Q8N4V1 131 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 BANPQ8N9N5 519 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 OR2V1Q8NHB1 315 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 GPR151Q8TDV0 419 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 RNF138Q8WVD3 245 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 ROBO4Q8WZ75 1007 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 HPS1Q92902 700 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 KISS1RQ969F8 398 aaPredicted RBP9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 SH3YL1Q96HL8 342 aaPredicted RBP9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 RNF145Q96MT1 663 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 GPR78Q96P69 363 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 HDHD5Q9BXW7 423 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 RTN4RQ9BZR6 473 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 GLRX2Q9NS18 164 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 FAIMQ9NVQ4 179 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 CDC42EP3Q9UKI2 254 aa9.36□□□□□ -0.91
CDC42BPB-207ENST00000560492 HMX2A2RU54 273 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 OVOL3O00110 214 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 UBFD1O14562 309 aaKnown RBP9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 GPRIN2O60269 458 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 ULK1O75385 1050 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 NTN1O95631 604 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 IL33O95760 270 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 NUDT14O95848 222 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 ANXA4P09525 319 aaPredicted RBP9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 PABPC4LP0CB38 370 aaKnown RBP9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 HSD3B1P14060 373 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 ZNF17P17021 662 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 HSD3B2P26439 372 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 TIA1P31483 386 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 GPC1P35052 558 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 CDH11P55287 796 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 CLCQ05315 142 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 BSPH1Q075Z2 132 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 RASA2Q15283 850 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 TAB1Q15750 504 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 IMPG1Q17R60 797 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 FREM1Q5H8C1 2179 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 C6orf52Q5T4I8 152 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 ESPNLQ6ZVH7 1005 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 METTL6Q8TCB7 284 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 ZNF483Q8TF39 744 aaPredicted RBP9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 OSTF1Q92882 214 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 CHMP6Q96FZ7 201 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 APIPQ96GX9 242 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 OR10A4Q9H209 315 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 MRPL46Q9H2W6 279 aaKnown RBP9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 POU2F3Q9UKI9 436 aa9.35□□□□□ -0.91
CDC42BPB-207ENST00000560492 A0A087WV62 115 aa9.34□□□□□ -0.91
CDC42BPB-207ENST00000560492 A0A087WZY1 265 aa9.34□□□□□ -0.91
CDC42BPB-207ENST00000560492 A0A0J9YW62 118 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms