RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 SIDT1Q9NXL6 827 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 REV1Q9UBZ9 1251 aa10.05□□□□□ -0.8
SNRPA1-211ENST00000560433 ZFHX4Q86UP3 3567 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 BLACEA4D250 179 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 IDSB3KWA1 339 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 POLR1CO15160 346 aaPredicted RBP10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 WBP4O75554 376 aaKnown RBP10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 HTR1AP08908 422 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 RPS4Y1P22090 263 aaKnown RBP10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 GPR4P46093 362 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 MAPK10P53779 464 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 OCA2Q04671 838 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 PMS2P3Q13401 168 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 MAD2L1BPQ15013 274 aaPredicted RBP10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 C9orf40Q8IXQ3 194 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 HOXB13Q92826 284 aaPredicted RBP10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 IL4I1Q96RQ9 567 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 ADOQ96SZ5 270 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 APOL4Q9BPW4 351 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 PLA2G12AQ9BZM1 189 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 UCK2Q9BZX2 261 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 MMACHCQ9Y4U1 282 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 A0A087WXM4 84 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 NTN3O00634 580 aaPredicted RBP10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 CDX4O14627 284 aaPredicted RBP10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 KRT20P35900 424 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 GRK6P43250 576 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 NR0B1P51843 470 aaKnown RBP10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 CRISP1P54107 249 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 UGT2B15P54855 530 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 DCDP81605 110 aaKnown RBP10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 MVKQ03426 396 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 OR1Q1Q15612 314 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 RRM2BQ7LG56 351 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 NRMQ8IXM6 262 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 RELTQ969Z4 430 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 KLHDC3Q9BQ90 382 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 TRIM45Q9H8W5 580 aaPredicted RBP10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 POLR1BQ9H9Y6 1135 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 MKKSQ9NPJ1 570 aaPredicted RBP10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 SRPK3Q9UPE1 567 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 LAMA5O15230 3695 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 KNTC1P50748 2209 aa10.04□□□□□ -0.8
SNRPA1-211ENST00000560433 C2orf92A0A1B0GVN3 265 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 IGKV3-11P04433 115 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 TP53P04637 393 aaPredicted RBP10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 HEXBP07686 556 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 THBS1P07996 1170 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 GGT2P36268 569 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 HLCSP50747 726 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 NR1H2P55055 460 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 ST3GAL3Q11203 375 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 ELAVL1Q15717 326 aaKnown RBP10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 CLEC12AQ5QGZ9 265 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 PARP8Q8N3A8 854 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 ZNF540Q8NDQ6 660 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 SETD9Q8NE22 299 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 OR5M3Q8NGP4 307 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 PFN4Q8NHR9 129 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 HDAC2Q92769 488 aaKnown RBP10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 SLC38A4Q969I6 547 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 NMD3Q96D46 503 aaKnown RBP10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 RTN4RQ9BZR6 473 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 ATP13A2Q9NQ11 1180 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 ZNF226Q9NYT6 803 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 SELENONQ9NZV5 590 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 ERVK-18Q9QC07 812 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 MEN1O00255 615 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 DUSP3P51452 185 aaPredicted RBP10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 MLLT10P55197 1068 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 SPEM2Q0P670 501 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 TRAM2Q15035 370 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 APOOLQ6UXV4 268 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 AHSA2Q719I0 299 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 KIF18BQ86Y91 864 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 APLFQ8IW19 511 aaPredicted RBP10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 CADM2Q8N3J6 435 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 DNAJA3Q96EY1 480 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 PITX2Q99697 317 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 C20orf141Q9NUB4 165 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 DNAJB12Q9NXW2 375 aaKnown RBP10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 PRODH2Q9UF12 536 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 MGAT4BQ9UQ53 548 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 NUP210LQ5VU65 1888 aa10.03□□□□□ -0.8
SNRPA1-211ENST00000560433 TRIM64A6NGJ6 449 aa10.02□□□□□ -0.81
SNRPA1-211ENST00000560433 CDC42EP2O14613 210 aa10.02□□□□□ -0.81
SNRPA1-211ENST00000560433 DYRK3O43781 588 aa10.02□□□□□ -0.81
SNRPA1-211ENST00000560433 ABCB7O75027 752 aa10.02□□□□□ -0.81
SNRPA1-211ENST00000560433 FAM20BO75063 409 aa10.02□□□□□ -0.81
SNRPA1-211ENST00000560433 REM1O75628 298 aa10.02□□□□□ -0.81
SNRPA1-211ENST00000560433 AK1P00568 194 aa10.02□□□□□ -0.81
SNRPA1-211ENST00000560433 ADAP00813 363 aa10.02□□□□□ -0.81
SNRPA1-211ENST00000560433 OSMP13725 252 aa10.02□□□□□ -0.81
SNRPA1-211ENST00000560433 RORAP35398 523 aa10.02□□□□□ -0.81
SNRPA1-211ENST00000560433 MAP2K4P45985 399 aa10.02□□□□□ -0.81
SNRPA1-211ENST00000560433 SMIM11AP58511 58 aa10.02□□□□□ -0.81
SNRPA1-211ENST00000560433 CD226Q15762 336 aa10.02□□□□□ -0.81
SNRPA1-211ENST00000560433 EIPR1Q53HC9 387 aa10.02□□□□□ -0.81
SNRPA1-211ENST00000560433 PLA2G2CQ5R387 149 aa10.02□□□□□ -0.81
SNRPA1-211ENST00000560433 ZNF385CQ66K41 422 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms