RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 ZNF141Q15928 474 aa19.87■□□□□ 0.77
SNX1-210ENST00000560260 HYAL4Q2M3T9 481 aa19.87■□□□□ 0.77
SNX1-210ENST00000560260 KLHL26Q53HC5 615 aa19.87■□□□□ 0.77
SNX1-210ENST00000560260 PDZK1Q5T2W1 519 aa19.87■□□□□ 0.77
SNX1-210ENST00000560260 OR5M10Q6IEU7 315 aa19.87■□□□□ 0.77
SNX1-210ENST00000560260 CALHM3Q86XJ0 350 aa19.87■□□□□ 0.77
SNX1-210ENST00000560260 ZZZ3Q8IYH5 903 aa19.87■□□□□ 0.77
SNX1-210ENST00000560260 TMEM251Q8N6I4 163 aa19.87■□□□□ 0.77
SNX1-210ENST00000560260 OR10A6Q8NH74 314 aa19.87■□□□□ 0.77
SNX1-210ENST00000560260 NFKBIDQ8NI38 313 aa19.87■□□□□ 0.77
SNX1-210ENST00000560260 CPT1CQ8TCG5 803 aa19.87■□□□□ 0.77
SNX1-210ENST00000560260 KLHDC3Q9BQ90 382 aa19.87■□□□□ 0.77
SNX1-210ENST00000560260 TBL1XR1Q9BZK7 514 aa19.87■□□□□ 0.77
SNX1-210ENST00000560260 TMEM38AQ9H6F2 299 aa19.87■□□□□ 0.77
SNX1-210ENST00000560260 THUMPD1Q9NXG2 353 aaKnown RBP19.87■□□□□ 0.77
SNX1-210ENST00000560260 BOKQ9UMX3 212 aaPredicted RBP19.87■□□□□ 0.77
SNX1-210ENST00000560260 A0A1W2PQD3 144 aa19.86■□□□□ 0.77
SNX1-210ENST00000560260 EIF4E1BA6NMX2 242 aaKnown RBP19.86■□□□□ 0.77
SNX1-210ENST00000560260 CELA3AP09093 270 aa19.86■□□□□ 0.77
SNX1-210ENST00000560260 T-ENOLP0DO92 83 aa19.86■□□□□ 0.77
SNX1-210ENST00000560260 PPIAP62937 165 aaKnown RBP19.86■□□□□ 0.77
SNX1-210ENST00000560260 PLAURQ03405 335 aa19.86■□□□□ 0.77
SNX1-210ENST00000560260 NDUFAF6Q330K2 333 aa19.86■□□□□ 0.77
SNX1-210ENST00000560260 TIGD3Q6B0B8 471 aa19.86■□□□□ 0.77
SNX1-210ENST00000560260 TRPM8Q7Z2W7 1104 aa19.86■□□□□ 0.77
SNX1-210ENST00000560260 PACS2Q86VP3 889 aa19.86■□□□□ 0.77
SNX1-210ENST00000560260 FAR1Q8WVX9 515 aa19.86■□□□□ 0.77
SNX1-210ENST00000560260 NR4A3Q92570 626 aa19.86■□□□□ 0.77
SNX1-210ENST00000560260 GNRHR2Q96P88 292 aa19.86■□□□□ 0.77
SNX1-210ENST00000560260 TREX2Q9BQ50 279 aaPredicted RBP19.86■□□□□ 0.77
SNX1-210ENST00000560260 HOXD1Q9GZZ0 328 aa19.86■□□□□ 0.77
SNX1-210ENST00000560260 UBQLN3Q9H347 655 aa19.86■□□□□ 0.77
SNX1-210ENST00000560260 PIF1Q9H611 641 aa19.86■□□□□ 0.77
SNX1-210ENST00000560260 FBXL2Q9UKC9 423 aa19.86■□□□□ 0.77
SNX1-210ENST00000560260 C15orf41Q9Y2V0 281 aa19.86■□□□□ 0.77
SNX1-210ENST00000560260 SCDO00767 359 aa19.85■□□□□ 0.77
SNX1-210ENST00000560260 BCAS1O75363 584 aaPredicted RBP19.85■□□□□ 0.77
SNX1-210ENST00000560260 CRYABP02511 175 aaKnown RBP19.85■□□□□ 0.77
SNX1-210ENST00000560260 RPS4Y1P22090 263 aaKnown RBP19.85■□□□□ 0.77
SNX1-210ENST00000560260 MAGEA5P43359 124 aa19.85■□□□□ 0.77
SNX1-210ENST00000560260 CRISP3P54108 245 aa19.85■□□□□ 0.77
SNX1-210ENST00000560260 CDK6Q00534 326 aa19.85■□□□□ 0.77
SNX1-210ENST00000560260 ALDH6A1Q02252 535 aaKnown RBP19.85■□□□□ 0.77
SNX1-210ENST00000560260 ART3Q13508 389 aa19.85■□□□□ 0.77
SNX1-210ENST00000560260 CYP51A1Q16850 503 aa19.85■□□□□ 0.77
SNX1-210ENST00000560260 CMPK2Q5EBM0 449 aa19.85■□□□□ 0.77
SNX1-210ENST00000560260 PRICKLE2Q7Z3G6 844 aa19.85■□□□□ 0.77
SNX1-210ENST00000560260 SLC15A3Q8IY34 581 aa19.85■□□□□ 0.77
SNX1-210ENST00000560260 ZNF614Q8N883 585 aa19.85■□□□□ 0.77
SNX1-210ENST00000560260 FADS6Q8N9I5 356 aa19.85■□□□□ 0.77
SNX1-210ENST00000560260 SLX1AQ9BQ83 275 aa19.85■□□□□ 0.77
SNX1-210ENST00000560260 RSPO3Q9BXY4 272 aaPredicted RBP19.85■□□□□ 0.77
SNX1-210ENST00000560260 OLAHQ9NV23 265 aa19.85■□□□□ 0.77
SNX1-210ENST00000560260 L3MBTL1Q9Y468 752 aa19.85■□□□□ 0.77
SNX1-210ENST00000560260 DTNAQ9Y4J8 743 aa19.85■□□□□ 0.77
SNX1-210ENST00000560260 LIPGQ9Y5X9 500 aa19.85■□□□□ 0.77
SNX1-210ENST00000560260 IGLV3-32A0A0A0MS00 114 aa19.84■□□□□ 0.77
SNX1-210ENST00000560260 CCT8L1PA6NM43 557 aa19.84■□□□□ 0.77
SNX1-210ENST00000560260 CLDN24A6NM45 220 aa19.84■□□□□ 0.77
SNX1-210ENST00000560260 NME4O00746 187 aa19.84■□□□□ 0.77
SNX1-210ENST00000560260 TFECO14948 347 aaPredicted RBP19.84■□□□□ 0.77
SNX1-210ENST00000560260 SLC7A2P52569 658 aa19.84■□□□□ 0.77
SNX1-210ENST00000560260 PSME3P61289 254 aa19.84■□□□□ 0.77
SNX1-210ENST00000560260 SCARB2Q14108 478 aa19.84■□□□□ 0.77
SNX1-210ENST00000560260 SERPINA11Q86U17 422 aa19.84■□□□□ 0.77
SNX1-210ENST00000560260 PLCZ1Q86YW0 608 aa19.84■□□□□ 0.77
SNX1-210ENST00000560260 OR2M3Q8NG83 312 aa19.84■□□□□ 0.77
SNX1-210ENST00000560260 OR1J4Q8NGS1 313 aa19.84■□□□□ 0.77
SNX1-210ENST00000560260 DUSP19Q8WTR2 217 aa19.84■□□□□ 0.77
SNX1-210ENST00000560260 ZNF583Q96ND8 569 aa19.84■□□□□ 0.77
SNX1-210ENST00000560260 ZDHHC11Q9H8X9 412 aa19.84■□□□□ 0.77
SNX1-210ENST00000560260 BCL2L10Q9HD36 194 aa19.84■□□□□ 0.77
SNX1-210ENST00000560260 PPP4R1LQ9P1A2 415 aa19.84■□□□□ 0.77
SNX1-210ENST00000560260 C15orf38-AP3S2A0A0A6YYH1 394 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 SERINC4A6NH21 518 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 AGAP5A6NIR3 686 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 NPIPA5E9PKD4 350 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 NDUFB5O43674 189 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 UBOX5O94941 541 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 PGM3O95394 542 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 HPGDP15428 266 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 ELAVL4P26378 380 aaKnown RBP19.83■□□□□ 0.77
SNX1-210ENST00000560260 CLK3P49761 638 aaKnown RBP19.83■□□□□ 0.77
SNX1-210ENST00000560260 CBX1P83916 185 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 TLE1Q04724 770 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 FGFBP1Q14512 234 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 ZNF630Q2M218 657 aaPredicted RBP19.83■□□□□ 0.77
SNX1-210ENST00000560260 ARPINQ7Z6K5 226 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 SLC22A16Q86VW1 577 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 FAM109AQ8N4B1 249 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 ZNF527Q8NB42 609 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 BBS10Q8TAM1 723 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 PHOSPHO1Q8TCT1 267 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 NSL1Q96IY1 281 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 SH3GL1Q99961 368 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 HOPXQ9BPY8 73 aaPredicted RBP19.83■□□□□ 0.77
SNX1-210ENST00000560260 DSN1Q9H410 356 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 CALML5Q9NZT1 146 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 MED11Q9P086 117 aa19.83■□□□□ 0.77
SNX1-210ENST00000560260 SUCOQ9UBS9 1254 aaKnown RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms