RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 IL1F10Q8WWZ1 152 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 SMIM12Q96EX1 92 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 DNAJA3Q96EY1 480 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 ATF6BQ99941 703 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 GOLGA2P5Q9HBQ8 144 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 HRASLSQ9HDD0 168 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 A0A087WZY1 265 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 B3GALNT1O75752 331 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 BMXP51813 675 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 GPR176Q14439 515 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 PPP2R2DQ66LE6 453 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 PLBD1Q6P4A8 553 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 TRMT10BQ6PF06 316 aaKnown RBP13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 CILP2Q8IUL8 1156 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 POPDC3Q9HBV1 291 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 TCRBV7S2A1N4TA0A589 114 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 PPP1R2P9O14990 202 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 TUSC2O75896 110 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 HLA-AP01891 365 aaKnown RBP13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 RCAN2Q14206 197 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 TMEM201Q5SNT2 666 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 SLC7A5P1Q8MH63 180 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 SLC24A4Q8NFF2 622 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 OR1S2Q8NGQ3 325 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 SMAP2Q8WU79 429 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 HHIPL1Q96JK4 782 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZNF582Q96NG8 517 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 MCOLN1Q9GZU1 580 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 GAR1Q9NY12 217 aaKnown RBP13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 GPR39O43194 453 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 C8AP07357 584 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 TBPP20226 339 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 MAKP20794 623 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 TACR3P29371 465 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 PIGFQ07326 219 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZNF836Q6ZNA1 936 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 KDM8Q8N371 416 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 B3GNT7Q8NFL0 401 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 DTLQ9NZJ0 730 aa13.14□□□□□ -0.31
CSPG4P12-202ENST00000559989 TMEM233B4DJY2 109 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 ARPC1BO15143 372 aaKnown RBP13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 KCNK5O95279 499 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 DAOAP59103 153 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 CTXN1P60606 82 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 NAT8LQ8N9F0 302 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 FAM213BQ8TBF2 198 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 TMEM59Q9BXS4 323 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 DENRO43583 198 aaKnown RBP13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 OR8U8P0C7N1 319 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 RBMS1P29558 406 aaKnown RBP13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 HOXD12P35452 270 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 CLDN6P56747 220 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 RPL11P62913 178 aaKnown RBP13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 SEMG2Q02383 582 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 CYP1B1Q16678 543 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 GUK1Q16774 197 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 GDF6Q6KF10 455 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 BTNL8Q6UX41 500 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZFP41Q8N8Y5 198 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 GPR148Q8TDV2 347 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 MMP28Q9H239 520 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 EBF1Q9UH73 591 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 PSAT1Q9Y617 370 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZC3H13Q5T200 1668 aaKnown RBP13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 SMIM28A0A1B0GU29 152 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 GIPRP48546 466 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZNF678Q5SXM1 525 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 PRR36Q9H6K5 1346 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 NIPAL2Q9H841 368 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 PURGQ9UJV8 347 aaKnown RBP13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 TTC24A2A3L6 582 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 CDHR4A6H8M9 788 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 ADAMTS4O75173 837 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 PABPC4LP0CB38 370 aaKnown RBP13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 DEFA4P12838 97 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 M6PRP20645 277 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 AADACP22760 399 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 GMPRP36959 345 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 DLX5P56178 289 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 JAM2P57087 298 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 AKT1S1Q96B36 256 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 TCRBV5S4A2TA0A5A2 114 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 C1orf226A1L170 272 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 PRICKLE3O43900 615 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 CLIC3O95833 236 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 ARRB1P49407 418 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 RPS15P62841 145 aaKnown RBP13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 SLC35A2P78381 396 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 SUSD1Q6UWL2 747 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 C1orf87Q8N0U7 546 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 BRIX1Q8TDN6 353 aaKnown RBP13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 KCNK13Q9HB14 408 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZBTB20Q9HC78 741 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 BCORL1Q5H9F3 1711 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 FAM159BA6NKW6 160 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 MMP2P08253 660 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 TAP2Q03519 686 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 DESI1Q6ICB0 168 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 TSPYL5Q86VY4 417 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 IL22RA1Q8N6P7 574 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms