RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 TBXA2RP21731 343 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 GCKP35557 465 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 LHX2P50458 406 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 AGFG1P52594 562 aaKnown RBP13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 NDUFAF6Q330K2 333 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 ANXA8L1Q5VT79 327 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 RAET1LQ5VY80 246 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 TNFAIP8L2Q6P589 184 aaPredicted RBP13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 EPGNQ6UW88 154 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 DNAJC14Q6Y2X3 702 aaPredicted RBP13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 PM20D2Q8IYS1 436 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 UBQLNLQ8IYU4 475 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 OR9I1Q8NGQ6 314 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 LILRB4Q8NHJ6 448 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 ACTRT2Q8TDY3 377 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 RAB8BQ92930 207 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 C1GALT1C1Q96EU7 318 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 THOC1Q96FV9 657 aaKnown RBP13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 C7orf26Q96N11 449 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 EBF4Q9BQW3 602 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 G6PC3Q9BUM1 346 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 OR51I1Q9H343 314 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 UBQLN4Q9NRR5 601 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 INTS9Q9NV88 658 aaKnown RBP13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 ZNF446Q9NWS9 450 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 VDAC3Q9Y277 283 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 CRYBG3Q68DQ2 2970 aa13.44□□□□□ -0.26
RABGGTA-211ENST00000559850 ALG1L2C9J202 215 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 H0YC42 278 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 SCDO00767 359 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 EPPINO95925 133 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 PGRP06401 933 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 KRT16P08779 473 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 OR12D1P0DN82 309 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 HPGDP15428 266 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 ATP6V1C1P21283 382 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 UQCRC2P22695 453 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 ZFP36L2P47974 494 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 TPD52P55327 224 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 CLDN18P56856 261 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 C17orf67Q0P5P2 114 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 PDCD4Q53EL6 469 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 RIPPLY2Q5TAB7 128 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 HMGN2P46Q86SG4 172 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 ZNF614Q8N883 585 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 C9orf106Q8NAJ2 232 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 VPS37AQ8NEZ2 397 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 SMPDL3BQ92485 455 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 ARSGQ96EG1 525 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 OR52E6Q96RD3 313 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 SDF2Q99470 211 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 ZBTB18Q99592 522 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 SLC35A5Q9BS91 424 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 NPDC1Q9NQX5 325 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 ZNF337Q9Y3M9 751 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 PCDHGB3Q9Y5G1 929 aa13.43□□□□□ -0.26
RABGGTA-211ENST00000559850 UNC79Q9P2D8 2635 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 CENPVL1A0A0U1RR11 272 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 OR2M5A3KFT3 312 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 CLCA1A8K7I4 914 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 H3BML4 177 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 UBDO15205 165 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 SEC14L5O43304 696 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 HNRNPRO43390 633 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 FCMRO60667 390 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 TNFRSF21O75509 655 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 SLC22A3O75751 556 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 NGFRP08138 427 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 HOXD4P09016 255 aaPredicted RBP13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 COX6B1P14854 86 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 IDO1P14902 403 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 CPN1P15169 458 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 ZNF708P17019 499 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 PTGER4P35408 488 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 CHI3L1P36222 383 aaPredicted RBP13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 IDH3AP50213 366 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 DPY19L1Q2PZI1 675 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 FLYWCH1Q4VC44 716 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 SAXO2Q658L1 398 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 AAGABQ6PD74 315 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 BHLHB9Q6PI77 547 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 ENPP6Q6UWR7 440 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 LACC1Q8IV20 430 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 RELL2Q8NC24 303 aaPredicted RBP13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 PNPT1Q8TCS8 783 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 PHOSPHO1Q8TCT1 267 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 CCDC115Q96NT0 180 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 PANX1Q96RD7 426 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 PTGES2Q9H7Z7 377 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 CHST11Q9NPF2 352 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 SLC6A13Q9NSD5 602 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 BTNL2Q9UIR0 455 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 MRPS18CQ9Y3D5 142 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 CELSR2Q9HCU4 2923 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 MED12LQ86YW9 2145 aa13.42□□□□□ -0.26
RABGGTA-211ENST00000559850 IGLV3-32A0A0A0MS00 114 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 CCDC154A6NI56 674 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 OPN1LWP04000 364 aa13.41□□□□□ -0.26
RABGGTA-211ENST00000559850 POU3F2P20265 443 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms