RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 B3GNT2Q9NY97 397 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 ENOPH1Q9UHY7 261 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 HCN2Q9UL51 889 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 PADI2Q9Y2J8 665 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 ATG4BQ9Y4P1 393 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 LAMA1P25391 3075 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 C1orf226A1L170 272 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 FFAR1O14842 300 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 AKAP8O43823 692 aaKnown RBP11.37□□□□□ -0.59
SEC11A-206ENST00000558924 MSL3P1P0C860 447 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 PRG2P13727 222 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 DDX6P26196 483 aaKnown RBP eCLIP11.37□□□□□ -0.59
SEC11A-206ENST00000558924 RPL3P39023 403 aaKnown RBP11.37□□□□□ -0.59
SEC11A-206ENST00000558924 RPS5P46782 204 aaKnown RBP11.37□□□□□ -0.59
SEC11A-206ENST00000558924 GIPRP48546 466 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 LBX1P52954 281 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 FABP5Q01469 135 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 C9orf50Q5SZB4 431 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 NUDT18Q6ZVK8 323 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 OR52I1Q8NGK6 324 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 WFIKKN2Q8TEU8 576 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 COQ10AQ96MF6 247 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 PITX2Q99697 317 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 CD93Q9NPY3 652 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 SAGE1Q9NXZ1 904 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 ATPIF1Q9UII2 106 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 ING4Q9UNL4 249 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 NCKAP1Q9Y2A7 1128 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 PRKNO60260 465 aaPredicted RBP11.37□□□□□ -0.59
SEC11A-206ENST00000558924 ALPPP05187 535 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 IL1RNP18510 177 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 MMP11P24347 488 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 GRPRP30550 384 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 ATP12AP54707 1039 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 B2MP61769 119 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 ZNF311Q5JNZ3 666 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 KIAA1211LQ6NV74 962 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 RPTNQ6XPR3 784 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 VRK2Q86Y07 508 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 TCTE3Q8IZS6 198 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 METTL27Q8N6F8 245 aaPredicted RBP11.37□□□□□ -0.59
SEC11A-206ENST00000558924 ASB12Q8WXK4 309 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 KATNB1Q9BVA0 655 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 FAIM2Q9BWQ8 316 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 MTIF3Q9H2K0 278 aaKnown RBP11.37□□□□□ -0.59
SEC11A-206ENST00000558924 SCPEP1Q9HB40 452 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 DIMT1Q9UNQ2 313 aaKnown RBP11.37□□□□□ -0.59
SEC11A-206ENST00000558924 KCNE3Q9Y6H6 103 aa11.37□□□□□ -0.59
SEC11A-206ENST00000558924 POM121BA6NF01 834 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 SRPRAP08240 638 aaKnown RBP11.36□□□□□ -0.59
SEC11A-206ENST00000558924 CISD3P0C7P0 127 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 ELAVL4P26378 380 aaKnown RBP11.36□□□□□ -0.59
SEC11A-206ENST00000558924 CCR6P51684 374 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 ERVK-21P61565 698 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 PLBD1Q6P4A8 553 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 PRSS45Q7RTY3 260 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 OR52E1Q8NGJ3 308 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 SPRYD4Q8WW59 207 aaPredicted RBP11.36□□□□□ -0.59
SEC11A-206ENST00000558924 CAMK1GQ96NX5 476 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 TEX12Q9BXU0 123 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 GABARAPL3Q9BY60 117 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 DDX31Q9H8H2 851 aaKnown RBP11.36□□□□□ -0.59
SEC11A-206ENST00000558924 TMEM45AQ9NWC5 275 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 KLHL42Q9P2K6 505 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 ZNF780BQ9Y6R6 833 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 ZNF670-ZNF695F2Z2N8 137 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 H0YC42 278 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 CACNB4O00305 520 aaPredicted RBP11.36□□□□□ -0.59
SEC11A-206ENST00000558924 MPZL2O60487 215 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 SOX30O94993 753 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 ARSBP15848 533 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 CRYBB2P43320 205 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 OR4D11Q8NGI4 311 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 GRHL3Q8TE85 626 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 VOPP1Q96AW1 172 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 ZNF707Q96C28 371 aaPredicted RBP11.36□□□□□ -0.59
SEC11A-206ENST00000558924 SEC22CQ9BRL7 303 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 GLIPR2Q9H4G4 154 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 C6orf106Q9H6K1 298 aaPredicted RBP11.36□□□□□ -0.59
SEC11A-206ENST00000558924 SNRNP200O75643 2136 aaKnown RBP11.36□□□□□ -0.59
SEC11A-206ENST00000558924 OR2W5A6NFC9 320 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 SOCS6O14544 535 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 LDB3O75112 727 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 EFEMP2O95967 443 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 GKN3PP0CG01 181 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 XCR1P46094 333 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 OR10A3P58181 314 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 EXOSC2Q13868 293 aaKnown RBP11.36□□□□□ -0.59
SEC11A-206ENST00000558924 EIF4HQ15056 248 aaKnown RBP11.36□□□□□ -0.59
SEC11A-206ENST00000558924 MLIPQ5VWP3 458 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 OR4C11Q6IEV9 310 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 C17orf107Q6ZR85 190 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 CPOQ8IVL8 374 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 SFTPA2Q8IWL1 248 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 LINC00518Q8N0U6 118 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 LINC01555Q8NAE3 123 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 OTUB2Q96DC9 234 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 LRIG1Q96JA1 1093 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 GABARAPL1Q9H0R8 117 aa11.36□□□□□ -0.59
SEC11A-206ENST00000558924 DPEP2Q9H4A9 486 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms