RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 TGM3Q08188 693 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ISXQ2M1V0 245 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 PDCD4Q53EL6 469 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CCDC157Q569K6 752 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 C9orf152Q5JTZ5 239 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 Q5PR19 223 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 C6orf136Q5SQH8 315 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 THEM4Q5T1C6 240 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 MSANTD1Q6ZTZ1 278 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CISD2Q8N5K1 135 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 Q8N9G6 341 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 RCBTB1Q8NDN9 531 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ZNF740Q8NDX6 193 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 BPIFCQ8NFQ6 507 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 RP9Q8TA86 221 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 PROKR1Q8TCW9 393 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CANT1Q8WVQ1 401 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 WFDC12Q8WWY7 111 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ROBO4Q8WZ75 1007 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 EME1Q96AY2 570 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 RGMAQ96B86 450 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 MTFMTQ96DP5 389 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 MTERF3Q96E29 417 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 C10orf90Q96M02 699 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 TEFMQ96QE5 360 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 DPH2Q9BQC3 489 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 MRPL1Q9BYD6 325 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 NLNQ9BYT8 704 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 STRADBQ9C0K7 418 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 KLHL25Q9H0H3 589 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ELOVL6Q9H5J4 265 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 EFCAB1Q9HAE3 211 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 MYNNQ9NPC7 610 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 PRDM7Q9NQW5 492 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 AIG1Q9NVV5 245 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 C1orf109Q9NX04 203 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 LYARQ9NX58 379 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 AHSPQ9NZD4 102 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 VPS29Q9UBQ0 182 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 DNAJB11Q9UBS4 358 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CHRNA9Q9UGM1 479 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 IL20RAQ9UHF4 553 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 RIMS3Q9UJD0 308 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CDC14AQ9UNH5 594 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 LYVE1Q9Y5Y7 322 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ZFHX4Q86UP3 3567 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 C2CD3Q4AC94 2353 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 EXPH5Q8NEV8 1989 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 IGLV3-12A0A075B6K2 115 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 ANKDD1BA6NHY2 528 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 MAGEB17A8MXT2 336 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 SOCS2O14508 198 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 FFAR3O14843 346 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 ANKRD28O15084 1053 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 GPR42O15529 346 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 P2RX6O15547 441 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 OR1F1O43749 312 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 SH3BGRLO75368 114 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 CRCPO75575 148 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 NSA2O95478 260 aaKnown RBP3.79□□□□□ -1.8
ZEB1-212ENST00000558655 ETHE1O95571 254 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 SERPINA3P01011 423 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 C1QCP02747 245 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 IGFBP1P08833 259 aaPredicted RBP3.79□□□□□ -1.8
ZEB1-212ENST00000558655 SLC35G6P0C7Q6 338 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 FTH1P19P0C7X4 201 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 PVRP15151 417 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 LBPP18428 481 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 CD82P27701 267 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 PRDX6P30041 224 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 TIA1P31483 386 aaKnown RBP eCLIP3.79□□□□□ -1.81e-5■■■□□ 19.1
ZEB1-212ENST00000558655 MC5RP33032 325 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 YAP1P46937 504 aaKnown RBP3.79□□□□□ -1.8
ZEB1-212ENST00000558655 ARSFP54793 590 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 GFRA1P56159 465 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 ITGA1P56199 1179 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 UFM1P61960 85 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 TSPAN5P62079 268 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 RPS13P62277 151 aaKnown RBP3.79□□□□□ -1.8
ZEB1-212ENST00000558655 PRR20EP86478 221 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 PRR20CP86479 221 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 PRR20DP86480 221 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 PRR20BP86481 221 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 PRR20AP86496 221 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 IL10RAQ13651 578 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 PDE7AQ13946 482 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 GRM7Q14831 915 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 C16orf72Q14CZ0 275 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 PRICKLE4Q2TBC4 344 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 TIGD2Q4W5G0 525 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 CT83Q5H943 113 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 C6orf10Q5SRN2 563 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 C18orf63Q68DL7 685 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 ANKRD34AQ69YU3 496 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 HMBOX1Q6NT76 420 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 PRMT9Q6P2P2 845 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 UGT2A3Q6UWM9 527 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 C16orf89Q6UX73 402 aa3.79□□□□□ -1.8
ZEB1-212ENST00000558655 ZNF517Q6ZMY9 492 aaPredicted RBP3.79□□□□□ -1.8
ZEB1-212ENST00000558655 FAM92BQ6ZTR7 304 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms