RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 AKAP10O43572 662 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 GMFGO60234 142 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 SMPD2O60906 423 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 SYNGR4O95473 234 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 ALOX5P09917 674 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 LINC00032P0C843 101 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 CRYGSP22914 178 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 MAPK1P28482 360 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 RPL3P39023 403 aaKnown RBP12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 EIF1AXP47813 144 aaKnown RBP12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 PRIM2P49643 509 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 TPD52P55327 224 aaPredicted RBP12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 TMEM44Q2T9K0 475 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 CPTPQ5TA50 214 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 PPP4R4Q6NUP7 873 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 ZNF474Q6S9Z5 364 aaPredicted RBP12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 STK32CQ86UX6 486 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 EXOC3L1Q86VI1 746 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 C10orf107Q8IVU9 208 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 WFDC11Q8NEX6 87 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 OR4C3Q8NH37 302 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 HOXB13Q92826 284 aaPredicted RBP12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 CAVIN3Q969G5 261 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 CIDECQ96AQ7 238 aaPredicted RBP12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 PIK3IP1Q96FE7 263 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 TSSK3Q96PN8 268 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 RTN4RQ9BZR6 473 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 PLSCR4Q9NRQ2 329 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 C6orf203Q9P0P8 240 aaPredicted RBP12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 VDAC3Q9Y277 283 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 FIS1Q9Y3D6 152 aa12.24□□□□□ -0.45
SNRPA1-204ENST00000558020 KCNK2O95069 426 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 OXSR1O95747 527 aaPredicted RBP12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 CGAP01215 116 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 SHBGP04278 402 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 FGF4P08620 206 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 PABPC4LP0CB38 370 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 SDC1P18827 310 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 HPCAL1P37235 193 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 MAP3K8P41279 467 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 EIF1P41567 113 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 RAC1P63000 192 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 ACKR1Q16570 336 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 RFTN2Q52LD8 501 aaPredicted RBP12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 ANKRD26P1Q6NSI1 321 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 APOOLQ6UXV4 268 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 Q6ZSR9 355 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 DDIASQ8IXT1 998 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 LRRC75A-AS1Q8N1F1 130 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 GTPBP8Q8N3Z3 284 aaPredicted RBP12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 NATD1Q8N6N6 113 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 COX18Q8N8Q8 333 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 OR6K3Q8NGY3 331 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 REXO5Q96IC2 774 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 GMPPAQ96IJ6 420 aaPredicted RBP12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 PRPF18Q99633 342 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 KLHL4Q9C0H6 718 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 HOXD1Q9GZZ0 328 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 TNFRSF12AQ9NP84 129 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 TIGARQ9NQ88 270 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 BAIAP2L1Q9UHR4 511 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 TRAF6Q9Y4K3 522 aa12.23□□□□□ -0.45
SNRPA1-204ENST00000558020 TLDC2A0PJX2 215 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 C7orf72A4D263 438 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 DEFB108AA8MXU0 73 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 H3BNH8 94 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 ADAMDEC1O15204 470 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 IGKV1D-16P01601 117 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 INHBBP09529 407 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 IL11P20809 199 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 ATP6V1C1P21283 382 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 FRKP42685 505 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 RPL38P63173 70 aaKnown RBP12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 SLC18A2Q05940 514 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 PDE7AQ13946 482 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 MLC1Q15049 377 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 EXOC3L2Q2M3D2 409 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 GALNTL6Q49A17 601 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 MFSD12Q6NUT3 480 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 FIGNL1Q6PIW4 674 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 C20orf204Q6ZNR8 217 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 BEND4Q6ZU67 534 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 ESPNLQ6ZVH7 1005 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 C4orf33Q8N1A6 199 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 ZNF527Q8NB42 609 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 SLC16A11Q8NCK7 471 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 OR10D3Q8NH80 312 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 FAM110BQ8TC76 370 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 JADE3Q92613 823 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 TRIM44Q96DX7 344 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 CHMP6Q96FZ7 201 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 ZC3HAV1LQ96H79 300 aaKnown RBP12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 FCRL1Q96LA6 429 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 PPP3R2Q96LZ3 170 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 GATA5Q9BWX5 397 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 BTBD2Q9BX70 525 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 GSX1Q9H4S2 264 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 ZNF395Q9H8N7 513 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 ATAD3AQ9NVI7 634 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms