RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 TNK1Q13470 666 aa13.22□□□□□ -0.29
CHD8-211ENST00000556833 FGFBP1Q14512 234 aa13.22□□□□□ -0.29
CHD8-211ENST00000556833 ZNF385BQ569K4 471 aa13.22□□□□□ -0.29
CHD8-211ENST00000556833 CCNJQ5T5M9 372 aa13.22□□□□□ -0.29
CHD8-211ENST00000556833 CLEC6AQ6EIG7 209 aa13.22□□□□□ -0.29
CHD8-211ENST00000556833 NOXRED1Q6NXP6 359 aa13.22□□□□□ -0.29
CHD8-211ENST00000556833 ATG4DQ86TL0 474 aaPredicted RBP13.22□□□□□ -0.29
CHD8-211ENST00000556833 SLC22A9Q8IVM8 553 aa13.22□□□□□ -0.29
CHD8-211ENST00000556833 OR6K3Q8NGY3 331 aa13.22□□□□□ -0.29
CHD8-211ENST00000556833 OR4C3Q8NH37 302 aa13.22□□□□□ -0.29
CHD8-211ENST00000556833 ROBO4Q8WZ75 1007 aa13.22□□□□□ -0.29
CHD8-211ENST00000556833 AKAP1Q92667 903 aaKnown RBP eCLIP13.22□□□□□ -0.29
CHD8-211ENST00000556833 NEUROG1Q92886 237 aa13.22□□□□□ -0.29
CHD8-211ENST00000556833 REPIN1Q9BWE0 567 aaKnown RBP13.22□□□□□ -0.29
CHD8-211ENST00000556833 C12orf65Q9H3J6 166 aaKnown RBP13.22□□□□□ -0.29
CHD8-211ENST00000556833 FBXO34Q9NWN3 711 aa13.22□□□□□ -0.29
CHD8-211ENST00000556833 MCTS1Q9ULC4 181 aaKnown RBP13.22□□□□□ -0.29
CHD8-211ENST00000556833 LAMP3Q9UQV4 416 aa13.22□□□□□ -0.29
CHD8-211ENST00000556833 A0A0J9YW62 118 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 A0A1W2PRB8 838 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 CCDC151A5D8V7 595 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 RNF223E7ERA6 249 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 LINC01387J3KSC0 135 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 HS3ST1O14792 307 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 PDPK1O15530 556 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 SS18L1O75177 396 aaPredicted RBP13.21□□□□□ -0.29
CHD8-211ENST00000556833 GSTA1P08263 222 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 ACP2P11117 423 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 SHC1P29353 583 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 PSMD4P55036 377 aaKnown RBP13.21□□□□□ -0.29
CHD8-211ENST00000556833 PRR5P85299 388 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 SLC18A2Q05940 514 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 VEZF1Q14119 521 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.21□□□□□ -0.29
CHD8-211ENST00000556833 TMEM44Q2T9K0 475 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 HBMQ6B0K9 141 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 MFSD12Q6NUT3 480 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 WDR75Q8IWA0 830 aaKnown RBP13.21□□□□□ -0.29
CHD8-211ENST00000556833 MMGT1Q8N4V1 131 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 ATP6V1C2Q8NEY4 427 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 JADE3Q92613 823 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 CHMP6Q96FZ7 201 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 GMPPAQ96IJ6 420 aaPredicted RBP13.21□□□□□ -0.29
CHD8-211ENST00000556833 CXorf56Q9H5V9 222 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 MED17Q9NVC6 651 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 EMCNQ9ULC0 261 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 GRID1Q9ULK0 1009 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 STK38LQ9Y2H1 464 aa13.21□□□□□ -0.29
CHD8-211ENST00000556833 NPIPA5A0A0B4J1W7 369 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 A0A1W2PPM1 405 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 NPIPA7E9PJI5 369 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 SEC22BO75396 215 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 NPIPA8P0DM63 369 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 MYL2P10916 166 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 PRPS2P11908 318 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 AGTR1P30556 359 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 CDKN1AP38936 164 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 ZNF41P51814 821 aaPredicted RBP13.2□□□□□ -0.3
CHD8-211ENST00000556833 CAPRIN1Q14444 709 aaKnown RBP13.2□□□□□ -0.3
CHD8-211ENST00000556833 WHAMMP3Q1A5X7 153 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 PLPPR5Q32ZL2 321 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 TIFABQ6ZNK6 161 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 NUP43Q8NFH3 380 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 OR2V1Q8NHB1 315 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHD8-211ENST00000556833 ABHD3Q8WU67 409 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 IGFBPL1Q8WX77 278 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 CAVIN3Q969G5 261 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 S100PBPQ96BU1 408 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 C16orf58Q96GQ5 468 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 ADGRG7Q96K78 797 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 TSSK3Q96PN8 268 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 TSPYL1Q9H0U9 437 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 C3orf14Q9HBI5 128 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 PLSCR4Q9NRQ2 329 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 GIN1Q9NXP7 522 aa13.2□□□□□ -0.3
CHD8-211ENST00000556833 ANK3Q12955 4377 aaKnown RBP13.2□□□□□ -0.3
CHD8-211ENST00000556833 CADP27708 2225 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 IGLV3-32A0A0A0MS00 114 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 G3V2L1 256 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 ZNF17P17021 662 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 GSTM5P46439 218 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 PCYT1AP49585 367 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 PRIM2P49643 509 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 KRTAP1-1Q07627 177 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 FAPQ12884 760 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 FOXF1Q12946 379 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 SLC29A2Q14542 456 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 CD226Q15762 336 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 DUSP5Q16690 384 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 GLYR1Q49A26 553 aaPredicted RBP13.19□□□□□ -0.3
CHD8-211ENST00000556833 CFAP157Q5JU67 520 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 ZYG11AQ6WRX3 759 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 SH2D5Q6ZV89 423 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 CXXC5Q7LFL8 322 aaKnown RBP13.19□□□□□ -0.3
CHD8-211ENST00000556833 NUFIP2Q7Z417 695 aaKnown RBP13.19□□□□□ -0.3
CHD8-211ENST00000556833 GSPT2Q8IYD1 628 aaKnown RBP13.19□□□□□ -0.3
CHD8-211ENST00000556833 GTPBP8Q8N3Z3 284 aaPredicted RBP13.19□□□□□ -0.3
CHD8-211ENST00000556833 CCDC63Q8NA47 563 aa13.19□□□□□ -0.3
CHD8-211ENST00000556833 SLC16A11Q8NCK7 471 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms