RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 KRT80Q6KB66 452 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 DHRS4L2Q6PKH6 230 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 CDH24Q86UP0 819 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 CARM1Q86X55 608 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 PIK3C3Q8NEB9 887 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 OR5D16Q8NGK9 328 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 KAT2AQ92830 837 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 PEX11GQ96HA9 241 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 MAGED4Q96JG8 741 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 ART5Q96L15 291 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 COL21A1Q96P44 957 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 PIP5K1AQ99755 562 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 YTHDF1Q9BYJ9 559 aaKnown RBP13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 POLR2J2Q9GZM3 115 aaKnown RBP13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 SPRTNQ9H040 489 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 POLR2J3Q9H1A7 115 aaKnown RBP13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 ARMC7Q9H6L4 198 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 CXorf21Q9HAI6 301 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 MKKSQ9NPJ1 570 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 PNPLA3Q9NST1 481 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 KLHL28Q9NXS3 571 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 NDUFAF4Q9P032 175 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 HCN3Q9P1Z3 774 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 SLC13A4Q9UKG4 626 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 ABCG2Q9UNQ0 655 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 CFL2Q9Y281 166 aa13.18□□□□□ -0.3
TRAPPC6B-206ENST00000556765 TMEM229AB2RXF0 380 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 hCG_2039718K7EN88 272 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 OXSR1O95747 527 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 OPN1SWP03999 348 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 THBS1P07996 1170 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 FGF5P12034 268 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 ANXA8P13928 327 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 FBLP22087 321 aaKnown RBP13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 XCR1P46094 333 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 HMGA2P52926 109 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 CASP9P55211 416 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 RPS15P62841 145 aaKnown RBP13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 SNRPNP63162 240 aaKnown RBP13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 PSPHP78330 225 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 BLMHQ13867 455 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 MAPK11Q15759 364 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 SYPL1Q16563 259 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 OTUD3Q5T2D3 398 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 RHBDD2Q6NTF9 364 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 FAM199XQ6PEV8 388 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 FAM111BQ6SJ93 734 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 ZNF517Q6ZMY9 492 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 TTLL10Q6ZVT0 673 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 GALNT10Q86SR1 603 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 SLC44A2Q8IWA5 706 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 PEX5LQ8IYB4 626 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 TMEM52Q8NDY8 209 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 OR7G1Q8NGA0 311 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 OR1L3Q8NH93 324 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 RIT1Q92963 219 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 LMF2Q9BU23 707 aaKnown RBP13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 MTHFD2LQ9H903 347 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 AKIRIN1Q9H9L7 192 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 ZNF304Q9HCX3 659 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 C14orf105Q9NVL8 296 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 PRODH2Q9UF12 536 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 ZNF232Q9UNY5 417 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 ACANP16112 2415 aa13.17□□□□□ -0.3
TRAPPC6B-206ENST00000556765 TNFRSF11BO00300 401 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 DLGAP1O14490 977 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 STX11O75558 287 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 JRKO75564 520 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 NKX2-2O95096 273 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 H6PDO95479 791 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 LGI1O95970 557 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 LYNP07948 512 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 CHRM4P08173 479 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 PABPC4LP0CB38 370 aaKnown RBP13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 ITGAMP11215 1152 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 FOLR1P15328 257 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 RRM2P31350 389 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 MAP3K8P41279 467 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 MGAT2Q10469 447 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 RAPSNQ13702 412 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 LARS2Q15031 903 aaKnown RBP13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 C6orf52Q5T4I8 152 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 FJX1Q86VR8 437 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 PPP1R3BQ86XI6 285 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 OR4N5Q8IXE1 308 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 COX18Q8N8Q8 333 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 SLC9A6Q92581 669 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 ALOXE3Q9BYJ1 711 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 ZNF350Q9GZX5 532 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 SAP130Q9H0E3 1048 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 SLC38A1Q9H2H9 487 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 ZNF696Q9H7X3 374 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 CHST11Q9NPF2 352 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 ADAP2Q9NPF8 381 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 EQTNQ9NQ60 294 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 KIF17Q9P2E2 1029 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 ACAD8Q9UKU7 415 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 RARRES3Q9UL19 164 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 WDR45Q9Y484 360 aa13.16□□□□□ -0.3
TRAPPC6B-206ENST00000556765 LYVE1Q9Y5Y7 322 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms