RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 BCORP1Q8N888 145 aa3.1□□□□□ -1.91
SCFD1-221ENST00000556534 OR2L5Q8NG80 312 aa3.1□□□□□ -1.91
SCFD1-221ENST00000556534 ARNTL2Q8WYA1 636 aa3.1□□□□□ -1.91
SCFD1-221ENST00000556534 TMEM80Q96HE8 168 aa3.1□□□□□ -1.91
SCFD1-221ENST00000556534 CRACR2AQ9BSW2 395 aa3.1□□□□□ -1.91
SCFD1-221ENST00000556534 NMNAT2Q9BZQ4 307 aa3.1□□□□□ -1.91
SCFD1-221ENST00000556534 NMUR2Q9GZQ4 415 aa3.1□□□□□ -1.91
SCFD1-221ENST00000556534 GLT8D2Q9H1C3 349 aa3.1□□□□□ -1.91
SCFD1-221ENST00000556534 ROPN1Q9HAT0 212 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-221ENST00000556534 PNO1Q9NRX1 252 aaKnown RBP3.1□□□□□ -1.91
SCFD1-221ENST00000556534 GDAP2Q9NXN4 497 aa3.1□□□□□ -1.91
SCFD1-221ENST00000556534 TMOD2Q9NZR1 351 aa3.1□□□□□ -1.91
SCFD1-221ENST00000556534 L3MBTL1Q9Y468 752 aa3.1□□□□□ -1.91
SCFD1-221ENST00000556534 U3KQV3 271 aa3.1□□□□□ -1.91
SCFD1-221ENST00000556534 USP6P35125 1406 aa3.1□□□□□ -1.91
SCFD1-221ENST00000556534 A0A087WZY1 265 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 A0A1B0GWJ7 208 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 WWP2O00308 870 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 APBB3O95704 486 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 RALAP11233 206 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 MGMTP16455 207 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 PSMB1P20618 241 aaKnown RBP3.09□□□□□ -1.91
SCFD1-221ENST00000556534 CYP2F1P24903 491 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 RPL4P36578 427 aaKnown RBP3.09□□□□□ -1.91
SCFD1-221ENST00000556534 OR3A4PP47883 348 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 DIO3P55073 304 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 DPYSL3Q14195 570 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 KRTAP13-3Q3SY46 172 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 RIPPLY2Q5TAB7 128 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 SLX4IPQ5VYV7 408 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 AFTPHQ6ULP2 937 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 ARSKQ6UWY0 536 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 SCARA5Q6ZMJ2 495 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 STAC2Q6ZMT1 411 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 TGIF2LYQ8IUE0 185 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 C16orf74Q96GX8 76 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 Q9H3A6 140 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 ASB8Q9H765 288 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 ACTR8Q9H981 624 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 ADAM22Q9P0K1 906 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 ATXN10Q9UBB4 475 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 GALPQ9UBC7 116 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 P2RX2Q9UBL9 471 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 ABCC4O15439 1325 aa3.09□□□□□ -1.91
SCFD1-221ENST00000556534 KDRP35968 1356 aa3.09□□□□□ -1.92
SCFD1-221ENST00000556534 TNRQ92752 1358 aa3.09□□□□□ -1.92
SCFD1-221ENST00000556534 A0A0U1RQV5 110 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 WI2-2373I1.2A0A1W2PRP0 233 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 ZSCAN5BA6NJL1 495 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 H3BTX0 84 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 OR7A17O14581 309 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 ANGPT2O15123 496 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 CLDN3O15551 220 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 ZNF254O75437 659 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 CD55P08174 381 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 KRT13P13646 458 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 CPN1P15169 458 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 CD1EP15812 388 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 ADSSP30520 456 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 UGT1A3P35503 534 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 MTTPP55157 894 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 RPL32P62910 135 aaKnown RBP3.08□□□□□ -1.92
SCFD1-221ENST00000556534 TFDP1Q14186 410 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 CAPRIN1Q14444 709 aaKnown RBP3.08□□□□□ -1.92
SCFD1-221ENST00000556534 ADPRMQ3LIE5 342 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 WSCD1Q658N2 575 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 SULT1C3Q6IMI6 304 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 CXCL17Q6UXB2 119 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 GRAMD2AQ8IUY3 354 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 OR2T34Q8NGX1 318 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 SETD7Q8WTS6 366 aaKnown RBP3.08□□□□□ -1.92
SCFD1-221ENST00000556534 ZNF606Q8WXB4 792 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 PSMG2Q969U7 264 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 MCHR2Q969V1 340 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 TADA1Q96BN2 335 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 IMMP1LQ96LU5 166 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 NOL4LQ96MY1 436 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-221ENST00000556534 LINC00167Q96N53 147 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 PLEKHF1Q96S99 279 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 TXN2Q99757 166 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 ERP44Q9BS26 406 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 TBC1D10AQ9BXI6 508 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 KAT8Q9H7Z6 458 aaKnown RBP3.08□□□□□ -1.92
SCFD1-221ENST00000556534 GPN2Q9H9Y4 310 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-221ENST00000556534 PALMDQ9NP74 551 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 TRPV5Q9NQA5 729 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 YAE1D1Q9NRH1 226 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 XPO7Q9UIA9 1087 aaKnown RBP3.08□□□□□ -1.92
SCFD1-221ENST00000556534 LAMP5Q9UJQ1 280 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 MGAT4BQ9UQ53 548 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 CUX2O14529 1486 aa3.08□□□□□ -1.92
SCFD1-221ENST00000556534 A0A1B0GUL7 405 aa3.07□□□□□ -1.92
SCFD1-221ENST00000556534 PANO1I0J062 215 aa3.07□□□□□ -1.92
SCFD1-221ENST00000556534 K7ENP7 123 aa3.07□□□□□ -1.92
SCFD1-221ENST00000556534 VPS26AO75436 327 aa3.07□□□□□ -1.92
SCFD1-221ENST00000556534 TSPAN8P19075 237 aa3.07□□□□□ -1.92
SCFD1-221ENST00000556534 SOX6P35712 828 aa3.07□□□□□ -1.92
SCFD1-221ENST00000556534 IFNAR2P48551 515 aa3.07□□□□□ -1.92
SCFD1-221ENST00000556534 HNMTP50135 292 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms