RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 MAS1P04201 325 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 NPPBP16860 134 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 MMP11P24347 488 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 IGFALSP35858 605 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 VSX2P58304 361 aaPredicted RBP14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 HYAL2Q12891 473 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 SYT14P1Q58G82 188 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 ALG10BQ5I7T1 473 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 LYPD4Q6UWN0 246 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 KCTD9Q7L273 389 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 SLC7A13Q8TCU3 470 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 CASTOR1Q8WTX7 329 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 WBP2Q969T9 261 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 SLC46A2Q9BY10 475 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 SRA1Q9HD15 236 aaKnown RBP14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 RXFP3Q9NSD7 469 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 FBXL3Q9UKT7 428 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 METTL21EPA6NDL7 271 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 PRAF2O60831 178 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 CSTAP01040 98 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 GDI2P50395 445 aaKnown RBP14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 SLC7A9P82251 487 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 HACD4Q5VWC8 232 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 HBMQ6B0K9 141 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 SERPINA12Q8IW75 414 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 ZNF615Q8N8J6 731 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 CAPNS2Q96L46 248 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 ZNF559Q9BR84 538 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 SLC39A1Q9NY26 324 aa14.12□□□□□ -0.15
ARHGEF40-207ENST00000556399 TRDV1A0A1B0GX56 115 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 FZD7O75084 574 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 GYPBP06028 91 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 ZDHHC11BP0C7U3 371 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 CHRNEQ04844 493 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 SCRN3Q0VDG4 424 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 BAK1Q16611 211 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 OLIG3Q7RTU3 272 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 OR6T1Q8NGN1 323 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 PCNPQ8WW12 178 aaKnown RBP14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 ATG5Q9H1Y0 275 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 RNF186Q9NXI6 227 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 A8MUA0 341 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 CLEC3AO75596 197 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 PLATP00750 562 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 TIAL1Q01085 375 aaKnown RBP eCLIP14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 COL28A1Q2UY09 1125 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 ZNF776Q68DI1 518 aaPredicted RBP14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 CCDC190Q86UF4 302 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 PRSS58Q8IYP2 241 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 GPR135Q8IZ08 494 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 GATSQ8NAP1 163 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 CDS1Q92903 461 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 C7orf50Q9BRJ6 194 aaKnown RBP14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 ALOXE3Q9BYJ1 711 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 CST11Q9H112 138 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 USP36Q9P275 1121 aaKnown RBP14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 RABL2AQ9UBK7 228 aaPredicted RBP14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 MAFFQ9ULX9 164 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 RABL2BQ9UNT1 228 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 GREB1LQ9C091 1923 aaPredicted RBP14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 B4DXG7 233 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 PPM1BO75688 479 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 GPR143P51810 404 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 RPS15AP62244 130 aaKnown RBP14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 ARHGAP19Q14CB8 494 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 NNATQ16517 81 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 ESCO2Q56NI9 601 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 FAM26DQ5JW98 314 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 IL17RDQ8NFM7 739 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 ZDHHC1Q8WTX9 485 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 GIMAP1Q8WWP7 306 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 PMEPA1Q969W9 287 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 PNO1Q9NRX1 252 aaKnown RBP14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 MED16Q9Y2X0 877 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 YARS2Q9Y2Z4 477 aaKnown RBP14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 A0A1W2PP55 124 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 DISC1C4P0D8 188 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 LDOC1O95751 146 aaPredicted RBP14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 OR3A2P47893 321 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 TRA2BP62995 288 aaKnown RBP14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 CCDC58Q4VC31 144 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 NUP54Q7Z3B4 507 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 TBC1D20Q96BZ9 403 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 SLC25A18Q9H1K4 315 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 HCFC1R1Q9NWW0 138 aa14.11□□□□□ -0.15
ARHGEF40-207ENST00000556399 HMGA1P17096 107 aaKnown RBP14.1□□□□□ -0.15
ARHGEF40-207ENST00000556399 SHC1P29353 583 aa14.1□□□□□ -0.15
ARHGEF40-207ENST00000556399 DECR1Q16698 335 aa14.1□□□□□ -0.15
ARHGEF40-207ENST00000556399 FAM69AQ5T7M9 428 aa14.1□□□□□ -0.15
ARHGEF40-207ENST00000556399 TPRA1Q86W33 373 aa14.1□□□□□ -0.15
ARHGEF40-207ENST00000556399 OR2L5Q8NG80 312 aa14.1□□□□□ -0.15
ARHGEF40-207ENST00000556399 SFXN5Q8TD22 340 aa14.1□□□□□ -0.15
ARHGEF40-207ENST00000556399 THRSPQ92748 146 aa14.1□□□□□ -0.15
ARHGEF40-207ENST00000556399 KCTD12Q96CX2 325 aaKnown RBP14.1□□□□□ -0.15
ARHGEF40-207ENST00000556399 MED30Q96HR3 178 aa14.1□□□□□ -0.15
ARHGEF40-207ENST00000556399 POTEKPQ9BYX7 375 aa14.1□□□□□ -0.15
ARHGEF40-207ENST00000556399 MED20Q9H944 212 aa14.1□□□□□ -0.15
ARHGEF40-207ENST00000556399 PLSCR3Q9NRY6 295 aa14.1□□□□□ -0.15
ARHGEF40-207ENST00000556399 MUTYHQ9UIF7 546 aa14.1□□□□□ -0.15
ARHGEF40-207ENST00000556399 MN1Q10571 1320 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms